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Repository for Nextflow pipeline to perform GWAS with longitudinal capabilities
Pure bash script to test and wait on the availability of a TCP host and port
GenoTracker is a FastAPI and Streamlit-based application for managing and visualizing genomic cohort data. The backend service is implemented using FastAPI, and the frontend is created with Streaml…
Scale your program across 1000s of computers with one line of code.
Cluster Toolkit is an open-source software offered by Google Cloud which makes it easy for customers to deploy AI/ML and HPC environments on Google Cloud.
Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity
Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool
Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF
Final version of the pipeline for processing TOPMED and other dbGaP datasets, includes: automatic identification of reference genome build and selection of correct chain file, mapping to GRCh37 ref…
Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.
The definitive guide to using Vector Search to solve your semantic search production workload needs.
This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GWAS.
GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comprehensive sample/variant QC, and ancestry estimation. Ideal f…
GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data