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HEST: Bringing Spatial Transcriptomics and Histopathology together
Biological foundation modeling from molecular to genome scale
Efficient Retrieval Augmentation and Generation Framework
Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".
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Control the fans of every Intel Mac to make it run cooler
TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty measures for gene expression predictions in single-cell spat…
R package to streamline use of the AllofUs researcher workbench
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Probabilistic cell segmentation for in situ spatial transcriptomics
Seamless operability between C++11 and Python
Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data generation or quality certification, and debates.
DuckDB is an analytical in-process SQL database management system
An open platform for training, serving, and evaluating large language models. Release repo for Vicuna and Chatbot Arena.
Testing building mulled containers for multi-requirement tools.
Central location for all Docker containers associated with WILDS workflows
Re-analysis of data provided by Gihawi et al. 2023 bioRxiv
ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
The repository for my YouTube video tutorial series - "Exploratory Data Analysis With Excel"
Reference models for Intel(R) Gaudi(R) AI Accelerator