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@wtsi-hgi

Wellcome Trust Sanger Institute - Human Genetics Informatics

Analysing genomic data at scale for the Human Genetics Program

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  1. nextflow-pipelines nextflow-pipelines Public

    Nextflow HGI pipelines

    Nextflow 4 2

  2. hail_analysis_pipelines hail_analysis_pipelines Public

    Hail based analysis pipelines for HG projects

    Python 1 2

  3. ibackup ibackup Public

    Performant backups of many files to iRODS

    Go

  4. softpack-web softpack-web Public

    Softpack Web provides a graphical user interface for Softpack services.

    TypeScript

  5. softpack-core softpack-core Public

    SoftPack Core

    Python

  6. go-softpack-builder go-softpack-builder Public

    Go implementation of a softpack builder service

    Go

Repositories

Showing 10 of 402 repositories
  • wes-qc Public

    Sample and variant QC for exome cohort studies

    wtsi-hgi/wes-qc’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 14, 2024
  • softpack-core Public

    SoftPack Core

    wtsi-hgi/softpack-core’s past year of commit activity
    Python 0 MIT 0 1 1 Updated Aug 14, 2024
  • spack-repo Public

    Spack Package Repository

    wtsi-hgi/spack-repo’s past year of commit activity
    Python 1 MIT 3 0 0 Updated Aug 14, 2024
  • yascp Public

    scRNA multimodal analysis pipeline utilised for large dataset processing

    wtsi-hgi/yascp’s past year of commit activity
    Python 14 GPL-3.0 7 0 0 Updated Aug 13, 2024
  • QTLight Public

    eqtl analysis pipeline using tensorqtl

    wtsi-hgi/QTLight’s past year of commit activity
    Python 6 GPL-3.0 5 0 0 Updated Aug 12, 2024
  • ibackup Public

    Performant backups of many files to iRODS

    wtsi-hgi/ibackup’s past year of commit activity
    Go 0 MIT 0 0 2 Updated Aug 9, 2024
  • farmers-report Public

    Weekly report for farm usage

    wtsi-hgi/farmers-report’s past year of commit activity
    R 0 0 0 3 Updated Aug 9, 2024
  • r-spack-recipe-builder Public

    Spack recipe creator for R packages in CRAN and Bioconductor used to build up the ubeR module for use in farm22

    wtsi-hgi/r-spack-recipe-builder’s past year of commit activity
    Python 0 0 0 0 Updated Aug 9, 2024
  • nf_tower_irods_to_lustre Public
    wtsi-hgi/nf_tower_irods_to_lustre’s past year of commit activity
    Nextflow 0 GPL-3.0 1 1 1 Updated Aug 9, 2024
  • uber-recipe-creator Public
    wtsi-hgi/uber-recipe-creator’s past year of commit activity
    Go 0 0 0 0 Updated Aug 8, 2024
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