Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
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Updated
Aug 14, 2024 - Python
Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
Axon/Myelin segmentation using Deep Learning
Jupyter notebooks for the analysis and visualization of data from the manuscript "Lineage tracing of Shh+ floor plate cells and dynamics of dorsal-ventral gene expression in the regenerating axolotl spinal cord". The notebooks include data preprocessing, data modeling, statistical analysis and plotting scripts used in the study.
Reference Guide for Spinal Cord Injury Medicine Resident Rotations
SpinalCordPlot: Visualization tool for qualitative analysis of spinal cord functional MRI data.
SpinalCord SDK for Python
Source code from PhD thesis.
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