Mixed models @lme4 + custom covariances + parameter constraints
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Updated
Jan 7, 2021 - R
Mixed models @lme4 + custom covariances + parameter constraints
An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.
An integrated pipeline for analysis and visualization of Population Structure and Relatedness based on genome-wide genetic variant data
Computation of pedigree-based relatedness coefficients. Part of the ped suite packages for pedigree analysis in R
Simulate patterns of DNA sharing between pedigree members
A legacy version of the ibdsim2 app for simulating and visualising genetic sharing between pedigree members.
Describe Pedigree Relationships In Words
grups.plots is a companion R package to grups-rs, providing with a Shiny dashboard, harboring multiple interactive visualizations, utilities and summary statistics to analyse its results
Source material for "Relatedness, Complexity and Local Growth"
Bioinformatic R/Rmd-code for scientific paper published in BMC Genomics
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