Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
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Updated
Jul 17, 2024 - Parrot
Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
📚 Tools and databases for analyzing HLA and VDJ genes.
Deep learning framework for proteomics
Mirror of OpenRTI on SourceForge. Do not create PR's. Instead send patches or git pull commands to the mailing list on SF.
Precision HLA typing from next-generation sequencing data
CERTI is an Open Source HLA RTI. HLA (High-Level Architecture) is a general purpose architecture for distributed computer simulation systems. In HLA systems, the RTI (RunTime Infrastructure) manages data exchange between simulations. CERTI supports HLA 1.3 specifications (C++ and Java) and partial IEEE 1516-v2000 and IEEE 1516-v2010 (C++) . CERT…
As a part of COVID-19 Host Genetics Initiative, we perform the following set of analyses to better understand the genetic basis of COVID-19 susceptibility and severity.
Kourami: Graph-guided assembly for HLA alleles
R package – HLA Genotype Imputation with Attribute Bagging (development version only)
A collection of modules to process and analyze IMGT-HLA sequences.
An HLA star-calling tool for PacBio HiFi data types
📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.
The repository contains all the code for the paper amino acid encoding using deep learning application
Code to run the scHLApers pipeline for personalized single-cell HLA quantification
🐶 hlabud: HLA genotype analysis in R
For IVCT Framework Developers. Core System for the IVCT (Integration, Verification and Certification Tool) for HLA Federates
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