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  • Jupyter Notebook MIT License Updated Oct 3, 2023
  • Python MIT License Updated Jul 2, 2023
  • spherediff Public

    Sample from the isotropic diffusion kernel on the surface of an n-dimensional unit sphere

    Python 1 MIT License Updated Jun 15, 2023
  • PyPivoter Public

    Count and/or list cliques of a graph using the Pivoter algorithm of Jain and Seshadhri.

    Cython 1 MIT License Updated Jun 16, 2022
  • Search the PDB for ligands that match a SMARTS string and generate input for COMBS.

    Python Updated Dec 1, 2021
  • pyRosetta exercises for 2021 UCSF Biophysics Onboarding

    Jupyter Notebook 1 1 Updated Sep 8, 2021
  • hsbbridge Public

    A transition path sampling (TPS) algorithm that enables double-ended Brownian trajectories to be sampled with hard sphere boundary conditions.

    C++ Updated Jun 25, 2018