I am a fourth-year graduate student in biophysics at UCSF, working in the DeGrado lab.
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UCSF
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Metalprot_learning Public
Forked from lonelu/Metalprot_learningPython MIT License UpdatedJul 2, 2023 -
spherediff Public
Sample from the isotropic diffusion kernel on the surface of an n-dimensional unit sphere
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PyPivoter Public
Count and/or list cliques of a graph using the Pivoter algorithm of Jain and Seshadhri.
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smarts_to_combs_csv Public
Search the PDB for ligands that match a SMARTS string and generate input for COMBS.
Python UpdatedDec 1, 2021 -
pyrosetta_onboarding Public
pyRosetta exercises for 2021 UCSF Biophysics Onboarding
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hsbbridge Public
A transition path sampling (TPS) algorithm that enables double-ended Brownian trajectories to be sampled with hard sphere boundary conditions.
C++ UpdatedJun 25, 2018