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  • Department of Applied Mathematics, National Sun Yat-sen University

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Jupyter Notebook 2 1 Updated Sep 11, 2024

Tools for High-dimensional, low-sample-size (HDLSS) data.

R 3 Updated Apr 22, 2024

A particle picking pipeline for cryo-EM micrographs using semantic segmentation trained by projection of reconstructed 3D volume.

Jupyter Notebook 2 1 Updated Apr 10, 2024

A curated list of awesome computational cryo-EM methods.

Jupyter Notebook 101 11 Updated Sep 17, 2024

This repository is a curated list of earthquake prediction models!

1 Updated Jun 24, 2024

Kolmogorov Arnold Networks

Jupyter Notebook 14,871 1,366 Updated Oct 15, 2024

A Framework for Orientation Recovery with Uncertainty Measurement in Cryo-EM Image Analysis

Jupyter Notebook 3 Updated Aug 25, 2024

A novel energy-aware pathfinding algorithm for searching the most probable conformational changes in cryo-EM data.

Jupyter Notebook 3 Updated Mar 29, 2024

Python scripts for easy RELION STAR file manipulation.

Python 21 2 Updated Oct 16, 2024

The programs of creating cryo-EM particle picking datasets

Python 61 4 Updated Sep 14, 2023

Everything starts as a graph

1 Updated Jul 24, 2023

A curated list of awesome computational cryo-ET methods.

36 1 Updated Oct 16, 2024
Python 42 6 Updated Oct 30, 2023

Automatic atomic model building program for cryo-EM maps

Python 117 18 Updated Jul 9, 2024

TensorFlow Similarity is a python package focused on making similarity learning quick and easy.

Python 1,011 104 Updated May 6, 2024

Learning to recover orientations from projections in single-particle cryo-EM

Jupyter Notebook 15 4 Updated Jan 30, 2022

R package for dimensionality reduction of small datasets

R 67 10 Updated Sep 15, 2024

Algorithms for Single Particle Reconstruction

Python 49 21 Updated Oct 18, 2024
C# 54 15 Updated May 14, 2024

Image-processing software for cryo-electron microscopy

C++ 447 200 Updated Oct 18, 2024

Minimal and clean examples of machine learning algorithms implementations

Python 10,722 1,783 Updated Mar 30, 2023

Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from linear regression to deep lear…

Python 23,914 4,582 Updated Oct 15, 2023

Extensible, parallel implementations of t-SNE

Python 1,459 161 Updated Aug 13, 2024

Implementation of a Bayesian approach to cryo-EM structure determination

MATLAB 9 2 Updated Nov 3, 2018
Jupyter Notebook 8 2 Updated Aug 5, 2023

A curated list of awesome side-channel attack resources

65 7 Updated Mar 14, 2024

Side Channels Analysis and Deep Learning

Python 178 60 Updated Mar 13, 2023

Conventions for 3DEM software packages

Python 19 3 Updated Feb 22, 2022

Cryo-EM Platform Integrates Competitive Algorithms to Meet Current Challenges

2 Updated Jun 16, 2019
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