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@nimh-dsst

National Institute of Mental Health Data Science & Sharing Team

Supporting investigators within the NIMH intramural research program in creating, distributing, and leveraging large, open datasets to accelerate discovery.

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  1. dataset-phenotypes dataset-phenotypes Public

    Preparatory scripts for BIDS tabular phenotypic data in large neuroimaging datasets.

    Python 7 2

Repositories

Showing 10 of 34 repositories
  • osm Public

    OpenSciMetrics (OSM) applies NLP and LLM-based metrics and indicators related to transparency, data sharing, rigor, and open science on biomedical publications.

    nimh-dsst/osm’s past year of commit activity
    Python 0 CC0-1.0 1 3 0 Updated Aug 9, 2024
  • nda-bids-upload Public Forked from DCAN-Labs/nda-bids-upload

    For uploading BIDS data to the NDA.

    nimh-dsst/nda-bids-upload’s past year of commit activity
    Python 0 BSD-3-Clause 1 2 0 Updated Aug 2, 2024
  • osm-rtrans-etl Public

    Extract, Transform, and load data associated with the rtransparent publication into a MongoDB database

    nimh-dsst/osm-rtrans-etl’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Jul 28, 2024
  • nimh-dsst/abcd-fasttrack2bids’s past year of commit activity
    Python 0 2 16 0 Updated Jul 24, 2024
  • sharestats-leo-notfork Public

    importing leo's code to get around LFS restriction on forks

    nimh-dsst/sharestats-leo-notfork’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 10, 2024
  • dsst-rtd Public

    DSST's readthedocs site repo.

    nimh-dsst/dsst-rtd’s past year of commit activity
    0 0 0 0 Updated Jul 3, 2024
  • nimh-dsst/dataSci_job_ad_2024’s past year of commit activity
    0 0 0 0 Updated Jun 20, 2024
  • nda-study-1887 Public

    Scripts and data files used to convert anatomical MRI dicom data of the Autism Subtypes study to BIDS format, and to upload the dataset to NIMH Data Archive

    nimh-dsst/nda-study-1887’s past year of commit activity
    Python 0 0 0 0 Updated Jun 12, 2024
  • dsst-defacing-pipeline Public

    Defacing algorithm to improve and evaluate accuracy for large datasets.

    nimh-dsst/dsst-defacing-pipeline’s past year of commit activity
    Python 2 2 15 3 Updated Jun 9, 2024
  • bids-validator-comparator Public

    A small set of scripts to BIDS-validate and compare validator version outputs for OpenNeuro datasets.

    nimh-dsst/bids-validator-comparator’s past year of commit activity
    Python 0 CC0-1.0 0 0 0 Updated May 14, 2024

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