Manages a testback of mulitple choice questions and coverts to a desired format.

Lightweight header-only C++ library for loading and traversing trees

TreeSAP: Tree SAmpling under Phylogenetic models

WebAssembly modules for genomics

Bicycle: Intervention-Based Causal Discovery with Cycles

Evolvable Hardware: Begin using the BitstreamEvolution Open Source Toolkit

Sample code to accompany the L1 evolutionary dynamics across eukaryotes manuscript. Shows how to perform two independent extraction methods: iterative search using LASTZ on genomic data, versus tra…

A C++ platform to perform parallel computations of optimisation tasks (global and local) via the asynchronous generalized island model.

An awesome list of complex systems science resources

For playing with swarm ideas

Get rich tool tips in your sphinx documentation!

A decorator used to automatically generate citations from Python code

ReStructuredText and Sphinx bridge to Doxygen

Python phylogeny tracker for in silico evolution experiments

Streaming de Bruijn and Compact de Bruijn Graph Algorithms

alifedata-phyloinformatics-conversion helps apply traditional phyloinformatics software to alife standardized data

A Python library for generating random phylogenetic trees and related data

A Python script that aggregates recent popular posts from your Mastodon timeline

EC-KitY is a scikit-learn-compatible Python tool kit for doing evolutionary computation.

Generic Evolvable Graphs for Efficient Learning of Artificial Tangled Intelligence. (A C++ framework for Tangled Program Graphs)

Anonymous Github is a proxy server to support anonymous browsing of Github repositories for open-science code and data.

Examples of how to create colorful, annotated equations in Latex using Tikz.

Animation engine for explanatory math videos

A visual tool for exploring decision trees in turned-based puzzles & games

A-Frame based React component for data visualization in VR

A javascript library for building, exploring, and sharing spatially structured models of biological systems

NK Model for a system with changing environment