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  • University of Oxford

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Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

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  • BamNado Public

    Rust Updated Aug 14, 2024

  • SeqNado Public

    Milne Lab ChIP-seq, ATAC-seq and RNA-seq pipeline

    Python 5 3 GNU General Public License v3.0 Updated Aug 9, 2024

  • rsbamtk Public

    Rust based BAM file toolkit

    Rust GNU General Public License v3.0 Updated Jul 3, 2024

  • plotnado Public

    Python 1 Updated Jul 2, 2024

  • CoolBox Public

    Forked from GangCaoLab/CoolBox

    Jupyter notebook based genomic data visualization toolkit.

    Python GNU General Public License v3.0 Updated Jul 2, 2024

  • TrackNado Public

    Command line utility to generate UCSC hubs from a set of files (e.g. bigWig, bigBed etc)

    Python 2 1 GNU General Public License v3.0 Updated Apr 22, 2024

  • single_cell_tools Public

    Bindings for rust tools designed to help with the brute force aspect of single cell data processing

    Rust Updated Feb 22, 2024

  • CapCruncherTools Public

    Faster utilities to speed up CapCruncher

    Rust 1 1 GNU General Public License v3.0 Updated Feb 20, 2024

  • genomics_utilities Public

    Jupyter Notebook Updated Sep 6, 2023

  • bioconda-recipes Public

    Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Shell MIT License Updated Aug 11, 2023

  • LanceOtron Public

    Forked from LHentges/LanceOtron
    Python GNU General Public License v3.0 Updated May 12, 2023

  • chipseq_tutorial Public

    Very quick ChIP-seq processing tutorial

    Jupyter Notebook Updated Apr 13, 2022

  • rust_tsv_tools Public

    Rust Updated Feb 11, 2022

  • signac Public

    Forked from stuart-lab/signac

    R toolkit for the analysis of single-cell chromatin data

    R Other Updated Jan 29, 2022

  • rust_bam_tools Public

    Tools for interacting with BAM files using Rust with Python bindings.

    Rust GNU General Public License v3.0 Updated Jan 27, 2022

  • ccanalyser Public archive

    Forked from sims-lab/CapCruncher
    Python GNU General Public License v3.0 Updated Aug 12, 2021

  • cgat-core Public

    Forked from cgat-developers/cgat-core

    Core functionality of the CGAT code

    Python MIT License Updated Oct 16, 2020

  • rnaseq_pipeline Public

    Python Updated May 27, 2020