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single-cell-5hmC Public
single-cell 5hmC-Seal with combinatorial split-pool barcoding
Perl UpdatedMar 12, 2024 -
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Sequencing_DNA_RNA_Protein Public
Perl, R, Python, and Bash Shell source codes for high-throughput sequencing (the 2nd, 3rd, and 4th generation sequencing for DNA, RNA, and Protein) data analysis by integrating lots of open-source …
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cfDNA-5hmC_LungCancer Public
Plasma cell-free DNA hydroxymethylomes discriminate disease state in EGFR-mutant non-small cell lung cancer.
R GNU General Public License v3.0 UpdatedMar 17, 2023 -
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xQTLs Public
Scripts for various molecular quantitative trait locus (xQTL) analysis.
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MAPBS Public
An All-in-one and Easy-to-use DNA Methylation Analysis Pipeline for Bulk and Single-cell BS-Seq Data
1 UpdatedJan 28, 2023 -
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2ndGS_Pipelines Public archive
Perl and R source codes for next generation (the second generation) sequencing data analysis by integrating lots of open-source softwares.
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SomeRecords Public archive
Some very useful records for me.
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m6A-SAC-seq Public archive
Perl, Bash shell, and R scripts for m6A-SAC-seq data analysis.
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ART_Epigeome Public archive
Source codes for the ART_Epigenome project, "Epigenetic Consequences of Assisted Reproduction in the Human Offspring".
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PipiDABS Public archive
PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.
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EED-HDAC Public archive
Bioinformatics analysis in EED-HDAC project, "Polycomb EED Orchestration of Heart Maturation is PRC2-independent".
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NucleosomeTurnover Public archive
Upstream and Downstream of locus-specific nucleosome turnover in adult mouse cardiomyocytes (as a instance or representation of non-proliferating mammalian cells).
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MDisProtein Public archive
Modelling and Prediction of protein distribution on subcellular and suborganelle level.