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1.1.0 by Imran McGrath, 7 months ago
Browse source code at https://github.com/cran/MOCHA
Authors: Samir Rachid Zaim [aut, ctb] , Mark-Phillip Pebworth [aut, ctb] , Imran McGrath [aut, cre] , Lauren Okada [aut, ctb] , Xiaojun Li [aut, ctb]
Documentation: PDF Manual
GPL (>= 3) license
Imports data.table, plyranges, dplyr, GenomicRanges, RaggedExperiment, MultiAssayExperiment, SummarizedExperiment, stringr, ggbio, wCorr, magrittr, rlang, AnnotationDbi, BiocGenerics, GenomeInfoDb, GenomicFeatures, IRanges, S4Vectors, assertthat, ensembldb, ggplot2, ggrepel, matrixStats, methods, qvalue, scales, tidyr, ggridges, pbapply, BSgenome, tidyselect, lifecycle
Suggests ArchR, RMariaDB, motifmatchr, BiocManager, TxDb.Hsapiens.UCSC.hg38.refGene, TxDb.Hsapiens.UCSC.hg19.knownGene, org.Hs.eg.db, BSgenome.Hsapiens.UCSC.hg19, withr, knitr, rmarkdown, chromVAR, testthat, uwot, irlba, glmmTMB, Matrix, waldo, purrr, lmerTest, Biobase, lme4, zip, rtracklayer, cowplot, mixtools, zoo
See at CRAN