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mtSSB mitochondrial single stranded DNA-binding protein [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5567789, updated on 15-May-2024

Summary

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Gene symbol
mtSSB
Gene description
mitochondrial single stranded DNA-binding protein
See related
VectorBase:AAEL000147
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL000147
Orthologs
fruit fly all
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Genomic context

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See mtSSB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 1 NC_035107.1 (194947334..194948175, complement)

Chromosome 1 - NC_035107.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110674586 Neighboring gene enolase-phosphatase E1-like Neighboring gene anaphase-promoting complex subunit 4 Neighboring gene cleavage and polyadenylation specificity factor subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035107.1 Chromosome 1 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Description of the transcriptomes of immune response-activated hemocytes from the mosquito vectors Aedes aegypti and Armigeres subalbatus. Bartholomay LC, et al. Infect Immun, 2004 Jul. PMID 15213157, Free PMC Article
  2. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-stranded DNA-binding protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035107.1 Reference AaegL5.0 Primary Assembly

    Range
    194947334..194948175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001657642.2 → XP_001657692.1  single-stranded DNA-binding protein, mitochondrial

    See identical proteins and their annotated locations for XP_001657692.1

    UniProtKB/TrEMBL
    A0A1S4EV31, Q17Q33
    Conserved Domains (2) summary
    COG0629
    Location:31 → 134
    Ssb; Single-stranded DNA-binding protein [Replication, recombination and repair]
    cl09930
    Location:28 → 136
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein Strain
Heading Accession and Version

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