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A1Q1_03910 hypothetical protein [ Trichosporon asahii var. asahii CBS 2479 ]

Gene ID: 25987423, updated on 19-Jun-2024

Summary

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Gene symbol
A1Q1_03910
Gene description
hypothetical protein
Locus tag
A1Q1_03910
See related
FungiDB:A1Q1_03910; VEuPathDB:A1Q1_03910
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichosporon asahii var. asahii CBS 2479 (strain: CBS 2479, variety: asahii, culture-collection: CBS:2479, type-material: culture from type material of Trichosporon asahii)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Trichosporonales; Trichosporonaceae; Trichosporon
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Genomic context

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See A1Q1_03910 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_014040855.1Genomic Context describing neighboring genes Neighboring gene actin cross-linking Neighboring gene NADP(+)-dependent 3-hydroxy acid dehydrogenase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014040855.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of CBS 2479, the standard type strain of Trichosporon asahii. Yang RY, et al. Eukaryot Cell, 2012 Nov. PMID 23104369, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-iditol 2-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sorbitol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014040855.1 Reference assembly

    Range
    296966..298330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014322335.1 → XP_014177810.1  hypothetical protein A1Q1_03910 [Trichosporon asahii var. asahii CBS 2479]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    J5SSC5, K1VH44
    Conserved Domains (2) summary
    COG1063
    Location:23 → 405
    Tdh; Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]
    cl16912
    Location:25 → 405
    MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family
Nucleotide Protein
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