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LOC131162668 cholesterol 22-monohydroxylase CYP90B51 [ Malania oleifera ]

Gene ID: 131162668, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131162668
Gene description
cholesterol 22-monohydroxylase CYP90B51
Gene type
protein coding
RefSeq status
MODEL
Organism
Malania oleifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Santalales; Ximeniaceae; Malania
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Genomic context

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See LOC131162668 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2987363v1 (GCF_029873635.1) 1 NC_080417.1 (31099377..31105213)

Chromosome 1 - NC_080417.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase DDM1 Neighboring gene small nucleolar RNA R71 Neighboring gene succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Neighboring gene SCARECROW-LIKE protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080417.1 Chromosome 1 Reference ASM2987363v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 22-monohydroxylase CYP90B51

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029873635.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2987363v1

Genomic

  1. NC_080417.1 Reference ASM2987363v1

    Range
    31099377..31105213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058119274.1 → XP_057975257.1  cholesterol 22-monohydroxylase CYP90B51

Nucleotide Protein
Heading Accession and Version

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