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LOC125216374 probable ribose-5-phosphate isomerase 1 [ Salvia hispanica ]

Gene ID: 125216374, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125216374
Gene description
probable ribose-5-phosphate isomerase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia hispanica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia incertae sedis
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Genomic context

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See LOC125216374 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current UniMelb_Shisp_WGS_1.0 (GCF_023119035.1) 3 NC_062967.1 (37397562..37398789, complement)

Chromosome 3 - NC_062967.1Genomic Context describing neighboring genes Neighboring gene repressor of RNA polymerase III transcription MAF1 homolog Neighboring gene sulfhydryl oxidase 2-like Neighboring gene uncharacterized LOC125210479 Neighboring gene uncharacterized LOC125216936 Neighboring gene MDIS1-interacting receptor like kinase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062967.1 Chromosome 3 Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ribose-5-phosphate isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia hispanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

Genomic

  1. NC_062967.1 Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

    Range
    37397562..37398789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048118065.1 → XP_047974022.1  probable ribose-5-phosphate isomerase 1

Nucleotide Protein
Heading Accession and Version

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