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AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 [ Talpa occidentalis (Iberian mole) ]

Gene ID: 119258260, updated on 21-Mar-2024

Summary

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Gene symbol
AGPAT5
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Talpa occidentalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa
Orthologs
human mouse all
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Genomic context

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See AGPAT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current MPIMG_talOcc4v2.1 (GCF_014898055.3) Unplaced Scaffold NW_023604295.1 (146799891..146836730, complement)

NW_023604295.1Genomic Context describing neighboring genes Neighboring gene beta-defensin 11-like Neighboring gene beta-defensin 1 Neighboring gene microcephalin 1 Neighboring gene angiopoietin 2 Neighboring gene uncharacterized LOC119257038

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023604295 Unplaced Scaffold Reference MPIMG_talOcc4v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014898055.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPIMG_talOcc4v2.1 Primary Assembly

Genomic

  1. NW_023604295.1 Reference MPIMG_talOcc4v2.1 Primary Assembly

    Range
    146799891..146836730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037526699.2 → XP_037382596.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:259 → 319
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

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