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LOC119215823 alpha-1A adrenergic receptor-like [ Pungitius pungitius (ninespine stickleback) ]

Gene ID: 119215823, updated on 1-Feb-2024

Summary

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Gene symbol
LOC119215823
Gene description
alpha-1A adrenergic receptor-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pungitius pungitius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius
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Genomic context

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See LOC119215823 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_01 current fPunPun2.1 (GCF_949316345.1) 16 NC_084915.1 (18557970..18561651, complement)
100 previous assembly NSP_V7 (GCF_902500615.1) Unplaced Scaffold NW_023616461.1 (17379517..17383000, complement)

Chromosome 16 - NC_084915.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 131-2-like Neighboring gene trafficking protein particle complex subunit 14-like Neighboring gene hepatitis A virus cellular receptor 1 homolog Neighboring gene NHP2 ribonucleoprotein homolog (yeast)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha1-adrenergic receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of heart rate by epinephrine-norepinephrine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1A adrenergic receptor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316345.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPunPun2.1

Genomic

  1. NC_084915.1 Reference fPunPun2.1

    Range
    18557970..18561651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037468276.2 → XP_037324173.2  alpha-1A adrenergic receptor-like

Nucleotide Protein
Heading Accession and Version

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