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sdhc succinate dehydrogenase complex, subunit C, integral membrane protein [ Anguilla anguilla (European eel) ]

Gene ID: 118234033, updated on 26-Jun-2024

Summary

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Gene symbol
sdhc
Gene description
succinate dehydrogenase complex, subunit C, integral membrane protein
See related
EnsemblRapid:ENSAANG00010012659
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
Orthologs
human zebrafish all
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Genomic context

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See sdhc in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 8 NC_049208.1 (5858350..5862183, complement)

Chromosome 8 - NC_049208.1Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule 3 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene zinc finger protein 23-like Neighboring gene zinc finger protein 271-like Neighboring gene ATPase Na+/K+ transporting subunit alpha 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049208.1 Chromosome 8 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase cytochrome b560 subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049208.1 Reference fAngAng1.pri Primary Assembly

    Range
    5858350..5862183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035430317.1 → XP_035286208.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A0E9X7V5
    Related
    ENSAANP00010031066.1, ENSAANT00010032377.1
    Conserved Domains (1) summary
    cd03499
    Location:49 → 167
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...
Nucleotide Protein
Heading Accession and Version

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