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LOC117924919 beta-amyrin 28-monooxygenase [ Vitis riparia (riverbank grape) ]

Gene ID: 117924919, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117924919
Gene description
beta-amyrin 28-monooxygenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117924919 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 11 NC_048441.1 (7950136..7952407, complement)

Chromosome 11 - NC_048441.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA Z247 Neighboring gene lupeol synthase-like Neighboring gene RING-H2 finger protein ATL13-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048441.1 Chromosome 11 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amyrin 28-monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048441.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    7950136..7952407 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034843656.1 → XP_034699547.1  beta-amyrin 28-monooxygenase

    Conserved Domains (1) summary
    cd11043
    Location:68 → 477
    CYP90-like; plant cytochrome P450s similar to cytochrome P450 family 90, subfamily A, polypeptide 1, cytochrome P450 family 90, subfamily B, polypeptide 1, and cytochrome P450 family 90, subfamily D, polypeptide 2
Nucleotide Protein
Heading Accession and Version

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