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pgm2 phosphoglucomutase 2 [ Oreochromis aureus ]

Gene ID: 116311137, updated on 18-Jun-2024

Summary

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Gene symbol
pgm2
Gene description
phosphoglucomutase 2
See related
Ensembl:ENSOABG00000004112
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See pgm2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 6 NC_052947.1 (22688986..22701349, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022246448.1 (457609..469901, complement)

Linkage Group 6 - NC_052947.1Genomic Context describing neighboring genes Neighboring gene Kruppel-like factor 3 (basic) Neighboring gene uncharacterized LOC116311136 Neighboring gene TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 Neighboring gene zinc finger, CCHC domain containing 7 Neighboring gene paired box 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopentomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine ribonucleoside salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglucomutase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052947.1 Reference ZZ_aureus Primary Assembly

    Range
    22688986..22701349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031728172.2 → XP_031584032.2  phosphoglucomutase-2

    UniProtKB/TrEMBL
    A0A668SF16
    Related
    ENSOABP00000013030.2, ENSOABT00000013457.2
    Conserved Domains (1) summary
    PTZ00150
    Location:10 → 610
    PTZ00150; phosphoglucomutase-2-like protein; Provisional
Nucleotide Protein Strain
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Gene LinkOut

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