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agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) [ Perca flavescens (yellow perch) ]

Gene ID: 114572008, updated on 15-Mar-2024

Summary

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Gene symbol
agpat5
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Locus tag
EPR50_G00177710
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See agpat5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 17 NC_041347.1 (16442197..16452829, complement)

Chromosome 17 - NC_041347.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase, alpha tandem duplicate 1 Neighboring gene transmembrane protein 14A Neighboring gene microcephalin 1 Neighboring gene angiopoietin 2a Neighboring gene cold-inducible RNA-binding protein B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041347.1 Chromosome 17 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041347.1 Reference PFLA_1.0 Primary Assembly

    Range
    16442197..16452829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028603380.1 → XP_028459181.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

    UniProtKB/TrEMBL
    A0A484CBM4
    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:258 → 298
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

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