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Idh isocitrate dehydrogenase [NADP] cytoplasmic [ Hyalella azteca ]

Gene ID: 108664542, updated on 3-Jul-2024

Summary

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Gene symbol
Idh
Gene description
isocitrate dehydrogenase [NADP] cytoplasmic
Locus tag
HAZT_HAZT010072
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyalella azteca
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Peracarida; Amphipoda; Senticaudata; Talitrida; Talitroidea; Hyalellidae; Hyalella
Orthologs
fruit fly all
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Genomic context

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See Idh in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Hazt_2.0.2 (GCF_000764305.2) Unplaced Scaffold NW_025937694.1 (66371..77832, complement)
100 previous assembly Hazt_2.0 (GCF_000764305.1) Unplaced Scaffold NW_017237740.1 (66371..77830, complement)

NW_025937694.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 6-like Neighboring gene caveolin-3 Neighboring gene ceramide synthase 3-like Neighboring gene ceramide synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyalella azteca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hazt_2.0.2 Primary Assembly

Genomic

  1. NW_025937694.1 Reference Hazt_2.0.2 Primary Assembly

    Range
    66371..77832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018151148.2 → XP_018006637.1  isocitrate dehydrogenase [NADP] cytoplasmic

    UniProtKB/TrEMBL
    A0A6A0H443, A0A8B7MYI6
Nucleotide Protein
Heading Accession and Version

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