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MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103919074, updated on 3-Aug-2024

Summary

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Gene symbol
MGAT5B
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Locus tag
AS28_12662
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See MGAT5B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824010.1 (2679001..2723778, complement)

NW_008824010.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein Rhes-like Neighboring gene SEC14 like lipid binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824010.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824010.1 Reference ASM69910v1 Primary Assembly

    Range
    2679001..2723778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009326532.1 → XP_009324807.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

    UniProtKB/TrEMBL
    A0A093NMM8
    Conserved Domains (1) summary
    pfam15024
    Location:121 → 718
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

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