+D GENES KO #

  KEGG Orthology (KO) - Candidatus Kinetoplastibacterium sorsogonicusi

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:kso00010] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CKSOR_00131 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CKSOR_00488 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CKSOR_00128 epd; D-erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CKSOR_00129 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CKSOR_00609 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CKSOR_00315 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CKSOR_00283 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CKSOR_00284 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:kso00020] D CKSOR_00426 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CKSOR_00425 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00205 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CKSOR_00204 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00283 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CKSOR_00284 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:kso00030] D CKSOR_00043 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CKSOR_00127 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CKSOR_00142 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CKSOR_00189 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CKSOR_00099 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CKSOR_00131 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:kso00040] D CKSOR_00519 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CKSOR_00043 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:kso00051] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CKSOR_00131 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CKSOR_00488 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:kso00052] D CKSOR_00519 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:kso00500] D CKSOR_00519 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:kso00520] D CKSOR_00038 glmS; Isomerizing glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CKSOR_00150 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CKSOR_00037 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CKSOR_00026 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CKSOR_00512 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CKSOR_00519 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CKSOR_00387 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:kso00620] D CKSOR_00283 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CKSOR_00284 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00166 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CKSOR_00452 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CKSOR_00578 gloB; Hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CKSOR_00427 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00315 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CKSOR_00009 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:kso00630] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:kso00640] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00166 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CKSOR_00452 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CKSOR_00204 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CKSOR_00205 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CKSOR_00497 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CKSOR_00496 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:kso00660] D CKSOR_00497 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CKSOR_00496 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CKSOR_00204 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CKSOR_00205 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CKSOR_00210 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CKSOR_00211 leuD1; 3-isopropylmalate dehydratase small subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CKSOR_00212 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:kso00562] D CKSOR_00160 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CKSOR_00488 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:kso00190] D CKSOR_00484 nqo7; NADH-quinone oxidoreductase subunit 7 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CKSOR_00483 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CKSOR_00482 nqo5; NADH-quinone oxidoreductase chain 5 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D CKSOR_00481 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D CKSOR_00480 nqo2; NADH-quinone oxidoreductase subunit 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CKSOR_00479 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CKSOR_00478 nqo3; NADH-quinone oxidoreductase chain 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CKSOR_00477 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CKSOR_00476 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CKSOR_00475 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CKSOR_00474 NADH-quinone oxidoreductase subunit 11 K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CKSOR_00473 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CKSOR_00472 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CKSOR_00471 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CKSOR_00624 cydA; Cytochrome bd-I ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CKSOR_00623 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CKSOR_00752 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CKSOR_00053 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CKSOR_00055 atpD1; ATP synthase subunit beta 1 K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CKSOR_00054 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CKSOR_00052 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CKSOR_00056 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CKSOR_00049 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CKSOR_00051 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CKSOR_00050 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CKSOR_00207 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CKSOR_00151 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:kso00710] D CKSOR_00129 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CKSOR_00128 epd; D-erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CKSOR_00131 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CKSOR_00127 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CKSOR_00189 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CKSOR_00488 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CKSOR_00043 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CKSOR_00142 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CKSOR_00427 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:kso00720] D CKSOR_00315 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00205 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CKSOR_00204 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CKSOR_00166 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CKSOR_00452 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CKSOR_00282 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] C 00680 Methane metabolism [PATH:kso00680] D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00131 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CKSOR_00315 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CKSOR_00609 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CKSOR_00414 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism D CKSOR_00075 cynT; Carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:kso00061] D CKSOR_00166 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CKSOR_00452 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CKSOR_00444 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis D CKSOR_00181 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CKSOR_00444 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism [PATH:kso00564] D CKSOR_00611 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CKSOR_00308 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CKSOR_00494 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CKSOR_00331 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CKSOR_00263 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CKSOR_00183 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D CKSOR_00112 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:kso00230] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CKSOR_00099 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CKSOR_00299 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CKSOR_00200 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CKSOR_00223 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CKSOR_00293 purL; Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CKSOR_00539 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CKSOR_00134 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CKSOR_00133 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CKSOR_00132 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CKSOR_00344 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CKSOR_00522 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CKSOR_00253 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CKSOR_00328 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CKSOR_00379 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CKSOR_00336 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CKSOR_00326 guaA_1; Glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CKSOR_00327 guaA_2; Glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CKSOR_00266 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CKSOR_00594 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CKSOR_00595 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CKSOR_00366 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CKSOR_00267 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CKSOR_00272 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CKSOR_00600 apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] C 00240 Pyrimidine metabolism [PATH:kso00240] D CKSOR_00144 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CKSOR_00143 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CKSOR_00202 pyrB; Aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CKSOR_00558 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CKSOR_00515 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CKSOR_00640 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CKSOR_00264 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CKSOR_00305 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CKSOR_00379 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CKSOR_00432 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CKSOR_00410 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CKSOR_00253 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CKSOR_00088 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CKSOR_00594 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CKSOR_00595 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CKSOR_00321 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CKSOR_00219 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CKSOR_00091 thyA; Thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:kso00250] D CKSOR_00366 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CKSOR_00344 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CKSOR_00202 pyrB; Aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CKSOR_00144 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CKSOR_00143 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CKSOR_00038 glmS; Isomerizing glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CKSOR_00299 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:kso00260] D CKSOR_00168 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CKSOR_00213 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CKSOR_00351 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CKSOR_00609 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CKSOR_00414 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00494 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CKSOR_00620 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CKSOR_00453 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CKSOR_00454 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:kso00270] D CKSOR_00648 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CKSOR_00168 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CKSOR_00213 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CKSOR_00351 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CKSOR_00428 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CKSOR_00414 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:kso00280] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:kso00290] D CKSOR_00620 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CKSOR_00210 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CKSOR_00211 leuD1; 3-isopropylmalate dehydratase small subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CKSOR_00212 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CKSOR_00497 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CKSOR_00496 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CKSOR_00495 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CKSOR_00077 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CKSOR_00009 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:kso00300] D CKSOR_00351 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CKSOR_00168 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CKSOR_00213 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CKSOR_00157 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CKSOR_00511 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CKSOR_00228 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CKSOR_00005 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CKSOR_00229 dapL; LL-diaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CKSOR_00227 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CKSOR_00649 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CKSOR_00667 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CKSOR_00659 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D CKSOR_00556 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] C 00310 Lysine degradation [PATH:kso00310] D CKSOR_00425 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:kso00220] D CKSOR_00337 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CKSOR_00144 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CKSOR_00143 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CKSOR_00191 argA; Amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CKSOR_00069 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CKSOR_00630 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CKSOR_00588 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CKSOR_00005 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism D CKSOR_00089 adiA; Biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] C 00340 Histidine metabolism [PATH:kso00340] D CKSOR_00025 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CKSOR_00367 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D CKSOR_00018 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CKSOR_00019 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CKSOR_00021 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CKSOR_00022 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CKSOR_00020 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CKSOR_00023 hisB; Histidine biosynthesis bifunctional protein HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00024 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:kso00350] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00360 Phenylalanine metabolism [PATH:kso00360] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CKSOR_00386 dadA1; D-amino acid dehydrogenase 1 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00380 Tryptophan metabolism D CKSOR_00425 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:kso00400] D CKSOR_00348 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CKSOR_00664 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D CKSOR_00597 aroQ1; 3-dehydroquinate dehydratase 1 K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CKSOR_00599 aroE; Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CKSOR_00665 aroK; Shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71] D CKSOR_00411 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CKSOR_00209 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CKSOR_00042 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CKSOR_00041 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CKSOR_00040 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CKSOR_00215 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CKSOR_00039 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CKSOR_00453 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CKSOR_00454 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CKSOR_00413 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CKSOR_00412 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D CKSOR_00603 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:kso00450] D CKSOR_00501 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CKSOR_00084 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:kso00470] D CKSOR_00551 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CKSOR_00554 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CKSOR_00649 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CKSOR_00667 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CKSOR_00386 dadA1; D-amino acid dehydrogenase 1 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:kso00480] D CKSOR_00434 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CKSOR_00345 yibF; putative GST-like protein YibF K00799 GST; glutathione S-transferase [EC:2.5.1.18] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:kso00540] D CKSOR_00431 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CKSOR_00625 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:kso00541] D CKSOR_00519 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CKSOR_00154 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CKSOR_00153 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CKSOR_00387 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D CKSOR_00037 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:kso00550] D CKSOR_00026 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CKSOR_00512 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CKSOR_00552 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CKSOR_00554 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CKSOR_00551 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CKSOR_00556 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D CKSOR_00307 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CKSOR_00162 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CKSOR_00555 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CKSOR_00553 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CKSOR_00666 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CKSOR_00633 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CKSOR_00654 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:kso00552] D CKSOR_00162 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:kso00730] D CKSOR_00063 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CKSOR_00238 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CKSOR_00359 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CKSOR_00064 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CKSOR_00602 thiE_2; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CKSOR_00262 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CKSOR_00404 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CKSOR_00272 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CKSOR_00579 tenA; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:kso00740] D CKSOR_00259 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CKSOR_00583 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CKSOR_00260 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CKSOR_00582 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CKSOR_00074 bsdB; putative UbiX-like flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:kso00750] D CKSOR_00534 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CKSOR_00414 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CKSOR_00353 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase 2 K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CKSOR_00180 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] C 00760 Nicotinate and nicotinamide metabolism [PATH:kso00760] D CKSOR_00455 pncB2; Nicotinate phosphoribosyltransferase 2 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CKSOR_00253 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CKSOR_00199 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CKSOR_00287 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CKSOR_00509 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:kso00770] D CKSOR_00497 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CKSOR_00496 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CKSOR_00495 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CKSOR_00077 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CKSOR_00661 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CKSOR_00603 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CKSOR_00656 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CKSOR_00220 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CKSOR_00104 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CKSOR_00065 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CKSOR_00181 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism D CKSOR_00613 bioC; Malonyl-[acyl-carrier protein] O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] C 00785 Lipoic acid metabolism [PATH:kso00785] D CKSOR_00325 lipM; Octanoyltransferase LipM K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00283 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CKSOR_00284 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CKSOR_00426 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CKSOR_00425 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:kso00790] D CKSOR_00358 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D CKSOR_00046 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CKSOR_00543 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CKSOR_00149 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CKSOR_00090 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CKSOR_00296 folC; Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CKSOR_00259 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CKSOR_00248 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CKSOR_00247 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CKSOR_00076 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CKSOR_00184 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:kso00670] D CKSOR_00090 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CKSOR_00282 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CKSOR_00223 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CKSOR_00522 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CKSOR_00091 thyA; Thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CKSOR_00646 ygfA; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D CKSOR_00648 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:kso00860] D CKSOR_00593 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CKSOR_00508 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:kso00130] D CKSOR_00660 plqA; 4-hydroxybenzoate solanesyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CKSOR_00125 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CKSOR_00074 bsdB; putative UbiX-like flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CKSOR_00044 ubiI; 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CKSOR_00418 ubiG; Ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CKSOR_00520 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CKSOR_00060 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CKSOR_00092 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:kso00900] D CKSOR_00359 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CKSOR_00309 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CKSOR_00469 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CKSOR_00097 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CKSOR_00468 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CKSOR_00377 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CKSOR_00750 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CKSOR_00074 bsdB; putative UbiX-like flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CKSOR_00360 ispA; Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CKSOR_00604 ispB; Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CKSOR_00307 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CKSOR_00127 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:kso00523] D CKSOR_00154 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CKSOR_00153 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CKSOR_00154 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:kso00261] D CKSOR_00168 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CKSOR_00213 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CKSOR_00157 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CKSOR_00511 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:kso00521] D CKSOR_00093 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CKSOR_00160 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CKSOR_00154 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CKSOR_00153 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D CKSOR_00154 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:kso00401] D CKSOR_00412 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CKSOR_00042 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CKSOR_00041 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CKSOR_00444 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:kso00999] D CKSOR_00648 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CKSOR_00599 aroE; Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D CKSOR_00243 fdx; 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S C 00627 Aminobenzoate degradation D CKSOR_00074 bsdB; putative UbiX-like flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:kso03020] D CKSOR_00703 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CKSOR_00702 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CKSOR_00670 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CKSOR_00265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:kso03010] D CKSOR_00409 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CKSOR_00303 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CKSOR_00690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CKSOR_00671 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CKSOR_00679 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CKSOR_00357 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CKSOR_00700 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CKSOR_00682 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CKSOR_00589 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CKSOR_00697 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CKSOR_00672 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CKSOR_00701 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CKSOR_00673 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CKSOR_00683 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CKSOR_00493 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CKSOR_00383 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CKSOR_00687 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CKSOR_00356 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CKSOR_00692 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CKSOR_00270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CKSOR_00365 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CKSOR_00706 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CKSOR_00693 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CKSOR_00696 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CKSOR_00695 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CKSOR_00684 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CKSOR_00681 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CKSOR_00704 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CKSOR_00355 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CKSOR_00705 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CKSOR_00707 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CKSOR_00590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CKSOR_00686 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CKSOR_00677 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CKSOR_00689 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CKSOR_00669 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CKSOR_00680 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CKSOR_00405 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CKSOR_00278 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CKSOR_00605 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CKSOR_00691 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CKSOR_00694 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CKSOR_00685 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CKSOR_00100 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CKSOR_00606 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CKSOR_00179 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CKSOR_00688 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CKSOR_00678 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CKSOR_00401 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CKSOR_00447 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CKSOR_00178 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CKSOR_00720 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CKSOR_00277 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CKSOR_00674 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CKSOR_00173 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:kso00970] D CKSOR_00116 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CKSOR_00562 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CKSOR_00170 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CKSOR_00155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CKSOR_00012 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CKSOR_00114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CKSOR_00514 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CKSOR_00098 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CKSOR_00115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CKSOR_00513 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CKSOR_00712 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CKSOR_00156 tRNA-His K14226 tRNA-His; tRNA His D CKSOR_00563 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CKSOR_00491 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00486 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00107 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CKSOR_00113 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CKSOR_00399 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00343 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00362 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CKSOR_00152 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CKSOR_00490 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00581 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00498 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00711 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CKSOR_00713 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CKSOR_00216 tRNA-Val K14237 tRNA-Val; tRNA Val D CKSOR_00338 tRNA-Val K14237 tRNA-Val; tRNA Val D CKSOR_00593 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CKSOR_00638 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CKSOR_00639 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CKSOR_00637 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CKSOR_00526 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CKSOR_00385 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CKSOR_00657 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CKSOR_00544 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CKSOR_00545 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CKSOR_00217 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CKSOR_00499 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CKSOR_00164 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CKSOR_00084 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CKSOR_00617 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CKSOR_00380 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CKSOR_00177 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CKSOR_00222 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CKSOR_00245 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CKSOR_00008 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CKSOR_00568 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CKSOR_00376 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CKSOR_00279 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CKSOR_00280 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CKSOR_00585 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CKSOR_00423 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:kso03008] D CKSOR_00439 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CKSOR_00403 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:kso03060] D CKSOR_00676 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CKSOR_00709 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CKSOR_00487 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CKSOR_00121 hypothetical protein K03072 secD; preprotein translocase subunit SecD D CKSOR_00120 hypothetical protein K03074 secF; preprotein translocase subunit SecF D CKSOR_00122 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CKSOR_00717 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CKSOR_00547 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CKSOR_00081 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CKSOR_00258 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CKSOR_00440 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CKSOR_00221 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:kso04122] D CKSOR_00238 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CKSOR_00384 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CKSOR_00347 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CKSOR_00608 moeB; Molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CKSOR_00082 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:kso03018] D CKSOR_00567 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CKSOR_00451 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CKSOR_00492 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CKSOR_00341 rnr_1; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CKSOR_00388 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D CKSOR_00506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CKSOR_00105 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CKSOR_00371 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CKSOR_00151 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CKSOR_00542 pcnB; Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:kso03030] D CKSOR_00576 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CKSOR_00192 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CKSOR_00139 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CKSOR_00322 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CKSOR_00176 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CKSOR_00435 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CKSOR_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CKSOR_00354 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CKSOR_00364 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00577 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CKSOR_00312 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:kso03410] D CKSOR_00459 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CKSOR_00642 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CKSOR_00095 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CKSOR_00165 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CKSOR_00463 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CKSOR_00641 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CKSOR_00269 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CKSOR_00288 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:kso03420] D CKSOR_00470 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CKSOR_00532 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CKSOR_00663 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CKSOR_00236 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CKSOR_00182 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CKSOR_00225 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:kso03430] D CKSOR_00158 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CKSOR_00537 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CKSOR_00225 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CKSOR_00288 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00192 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CKSOR_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CKSOR_00139 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CKSOR_00176 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CKSOR_00322 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CKSOR_00576 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CKSOR_00435 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:kso03440] D CKSOR_00288 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00437 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CKSOR_00141 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CKSOR_00203 recA; Protein RecA K03553 recA; recombination protein RecA D CKSOR_00524 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CKSOR_00525 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CKSOR_00523 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CKSOR_00332 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CKSOR_00192 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CKSOR_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CKSOR_00139 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CKSOR_00176 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CKSOR_00322 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CKSOR_00576 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CKSOR_00435 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CKSOR_00057 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:kso02010] D CKSOR_00030 mlaC; putative phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CKSOR_00032 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CKSOR_00033 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CKSOR_00034 mlaF; putative phospholipid import ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CKSOR_00290 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D CKSOR_00291 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CKSOR_00580 Putative multidrug export ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D CKSOR_00621 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CKSOR_00622 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:kso03070] D CKSOR_00121 hypothetical protein K03072 secD; preprotein translocase subunit SecD D CKSOR_00120 hypothetical protein K03074 secF; preprotein translocase subunit SecF D CKSOR_00709 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CKSOR_00487 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CKSOR_00676 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CKSOR_00122 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CKSOR_00717 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CKSOR_00547 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CKSOR_00258 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CKSOR_00081 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:kso02020] D CKSOR_00442 degQ; Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D CKSOR_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CKSOR_00615 resE; Sensor histidine kinase ResE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D CKSOR_00614 spo0F; Sporulation initiation phosphotransferase F K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D CKSOR_00624 cydA; Cytochrome bd-I ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CKSOR_00623 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CKSOR_00752 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome D CKSOR_00274 sodB; Superoxide dismutase Fe K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:kso02024] D CKSOR_00371 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CKSOR_00042 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CKSOR_00041 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CKSOR_00348 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CKSOR_00583 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CKSOR_00717 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CKSOR_00709 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CKSOR_00487 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CKSOR_00676 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CKSOR_00122 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CKSOR_00547 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CKSOR_00258 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CKSOR_00081 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CKSOR_00363 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:kso04981] D CKSOR_00646 ygfA; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D CKSOR_00090 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CKSOR_00584 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CKSOR_00091 thyA; Thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:kso01501] D CKSOR_00666 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CKSOR_00633 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:kso01502] D CKSOR_00551 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CKSOR_00555 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CKSOR_00553 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:kso01503] D CKSOR_00536 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CKSOR_00442 degQ; Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D CKSOR_00006 dsbA; Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:kso01000] C 01001 Protein kinases [BR:kso01001] D CKSOR_00615 resE; Sensor histidine kinase ResE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:kso01009] D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:kso01002] D CKSOR_00221 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CKSOR_00326 guaA_1; Glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CKSOR_00327 guaA_2; Glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CKSOR_00299 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CKSOR_00038 glmS; Isomerizing glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CKSOR_00434 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CKSOR_00227 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CKSOR_00302 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CKSOR_00148 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CKSOR_00442 degQ; Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D CKSOR_00654 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CKSOR_00232 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CKSOR_00234 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CKSOR_00440 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CKSOR_00651 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CKSOR_00591 pmbA; Metalloprotease PmbA K03592 pmbA; PmbA protein D CKSOR_00349 tldD; Metalloprotease TldD K03568 tldD; TldD protein D CKSOR_00368 hflC; Modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC D CKSOR_00369 hflK; Modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:kso01003] D CKSOR_00666 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:kso01005] D CKSOR_00431 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CKSOR_00625 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:kso01011] D CKSOR_00026 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CKSOR_00512 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CKSOR_00552 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CKSOR_00554 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CKSOR_00556 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D CKSOR_00551 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CKSOR_00555 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CKSOR_00553 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CKSOR_00162 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CKSOR_00271 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CKSOR_00666 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CKSOR_00633 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CKSOR_00654 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CKSOR_00627 rlpA; Endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CKSOR_00536 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:kso01004] D CKSOR_00112 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:kso01006] D CKSOR_00360 ispA; Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CKSOR_00604 ispB; Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CKSOR_00307 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CKSOR_00538 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CKSOR_00660 plqA; 4-hydroxybenzoate solanesyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:kso01007] D CKSOR_00593 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CKSOR_00526 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CKSOR_00585 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CKSOR_00423 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CKSOR_00164 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CKSOR_00008 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CKSOR_00084 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CKSOR_00222 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CKSOR_00380 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CKSOR_00177 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CKSOR_00245 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CKSOR_00657 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CKSOR_00376 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CKSOR_00544 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CKSOR_00545 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CKSOR_00499 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CKSOR_00568 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CKSOR_00217 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CKSOR_00385 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CKSOR_00279 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CKSOR_00280 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CKSOR_00235 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CKSOR_00229 dapL; LL-diaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CKSOR_00372 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CKSOR_00005 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CKSOR_00414 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:kso00194] D CKSOR_00056 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CKSOR_00055 atpD1; ATP synthase subunit beta 1 K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CKSOR_00054 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CKSOR_00053 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CKSOR_00052 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CKSOR_00051 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CKSOR_00050 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CKSOR_00049 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CKSOR_00048 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:kso03000] D CKSOR_00237 iscR; HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CKSOR_00521 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CKSOR_00461 bolA; DNA-binding transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CKSOR_00579 tenA; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CKSOR_00650 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:kso03021] D CKSOR_00670 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CKSOR_00703 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CKSOR_00702 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CKSOR_00265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CKSOR_00363 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CKSOR_00035 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D CKSOR_00396 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CKSOR_00261 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CKSOR_00708 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CKSOR_00015 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A D CKSOR_00014 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B D CKSOR_00650 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CKSOR_00145 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CKSOR_00388 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:kso03019] D CKSOR_00451 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CKSOR_00194 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CKSOR_00439 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CKSOR_00341 rnr_1; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CKSOR_00403 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CKSOR_00492 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CKSOR_00388 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D CKSOR_00506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CKSOR_00105 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CKSOR_00371 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CKSOR_00151 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CKSOR_00542 pcnB; Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CKSOR_00567 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CKSOR_00626 rapZ; RNase adapter protein RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:kso03011] D CKSOR_00409 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CKSOR_00303 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CKSOR_00690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CKSOR_00671 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CKSOR_00679 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CKSOR_00357 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CKSOR_00700 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CKSOR_00682 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CKSOR_00589 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CKSOR_00697 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CKSOR_00672 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CKSOR_00701 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CKSOR_00673 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CKSOR_00683 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CKSOR_00493 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CKSOR_00383 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CKSOR_00687 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CKSOR_00356 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CKSOR_00692 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CKSOR_00270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CKSOR_00365 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CKSOR_00706 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CKSOR_00693 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CKSOR_00696 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CKSOR_00695 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CKSOR_00684 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CKSOR_00681 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CKSOR_00355 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CKSOR_00705 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CKSOR_00707 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CKSOR_00704 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CKSOR_00590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CKSOR_00686 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CKSOR_00677 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CKSOR_00689 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CKSOR_00669 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CKSOR_00680 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CKSOR_00405 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CKSOR_00278 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CKSOR_00605 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CKSOR_00691 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CKSOR_00694 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CKSOR_00685 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CKSOR_00606 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CKSOR_00179 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CKSOR_00688 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CKSOR_00678 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CKSOR_00401 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CKSOR_00447 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CKSOR_00178 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CKSOR_00720 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CKSOR_00277 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CKSOR_00674 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CKSOR_00100 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CKSOR_00173 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:kso03009] D CKSOR_00439 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CKSOR_00403 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CKSOR_00438 era; GTPase Era K03595 era; GTPase D CKSOR_00607 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D CKSOR_00650 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CKSOR_00396 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CKSOR_00261 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CKSOR_00708 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CKSOR_00110 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CKSOR_00616 rsmB_2; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CKSOR_00224 rsmB_1; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CKSOR_00257 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CKSOR_00126 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CKSOR_00714 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CKSOR_00557 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CKSOR_00449 rsmI_1; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CKSOR_00628 rsmI_2; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CKSOR_00340 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CKSOR_00147 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CKSOR_00255 rlmJ; Ribosomal RNA large subunit methyltransferase J K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D CKSOR_00429 rlmL; Ribosomal RNA large subunit methyltransferase L K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D CKSOR_00378 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CKSOR_00398 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CKSOR_00450 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CKSOR_00421 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CKSOR_00464 rimI; Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CKSOR_00382 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CKSOR_00596 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CKSOR_00226 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CKSOR_00451 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CKSOR_00194 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CKSOR_00601 yqgF; Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CKSOR_00404 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CKSOR_00373 der; GTPase Der K03977 engA; GTPase D CKSOR_00370 hflX; GTPase HflX K03665 hflX; GTPase D CKSOR_00135 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CKSOR_00394 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CKSOR_00397 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CKSOR_00198 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D CKSOR_00117 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D CKSOR_00146 RNA-binding protein K07574 yhbY; RNA-binding protein D CKSOR_00103 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:kso03016] D CKSOR_00645 cca; Multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CKSOR_00593 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CKSOR_00568 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CKSOR_00222 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CKSOR_00177 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CKSOR_00084 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CKSOR_00526 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CKSOR_00008 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CKSOR_00245 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CKSOR_00657 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CKSOR_00385 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CKSOR_00217 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CKSOR_00499 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CKSOR_00164 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CKSOR_00380 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CKSOR_00376 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CKSOR_00279 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CKSOR_00280 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CKSOR_00585 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CKSOR_00423 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CKSOR_00017 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CKSOR_00214 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CKSOR_00393 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CKSOR_00238 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CKSOR_00135 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CKSOR_00538 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CKSOR_00716 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CKSOR_00715 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CKSOR_00719 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CKSOR_00295 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CKSOR_00598 rnr_2; Ribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CKSOR_00530 ettA; Energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D CKSOR_00544 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CKSOR_00545 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CKSOR_00249 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CKSOR_00208 dusA; tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CKSOR_00119 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CKSOR_00381 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CKSOR_00612 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CKSOR_00313 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CKSOR_00347 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CKSOR_00045 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CKSOR_00384 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CKSOR_00240 iscA; Iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein D CKSOR_00320 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CKSOR_00124 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CKSOR_00076 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CKSOR_00248 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CKSOR_00247 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CKSOR_00184 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CKSOR_00389 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D CKSOR_00123 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CKSOR_00167 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CKSOR_00465 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CKSOR_00252 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CKSOR_00535 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CKSOR_00533 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CKSOR_00341 rnr_1; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CKSOR_00492 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:kso03012] D CKSOR_00395 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CKSOR_00218 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CKSOR_00304 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CKSOR_00698 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu D CKSOR_00699 fusA; Elongation factor G K02355 fusA; elongation factor G D CKSOR_00071 prfA; Peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1 D CKSOR_00306 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D CKSOR_00072 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CKSOR_00101 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CKSOR_00675 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CKSOR_00171 efp; Elongation factor P K02356 efp; elongation factor P D CKSOR_00246 prfB; Peptide chain release factor RF2 K02836 prfB; peptide chain release factor 2 D CKSOR_00011 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:kso03110] D CKSOR_00187 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CKSOR_00233 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CKSOR_00652 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CKSOR_00506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CKSOR_00242 hscA; Chaperone protein HscA K04044 hscA; molecular chaperone HscA D CKSOR_00105 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CKSOR_00505 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CKSOR_00241 hscB; Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D CKSOR_00507 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D CKSOR_00106 groS3; 10 kDa chaperonin 3 K04078 groES; chaperonin GroES D CKSOR_00442 degQ; Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D CKSOR_00148 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CKSOR_00049 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CKSOR_00163 Peptidyl-prolyl cis-trans isomerase cyp18 K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CKSOR_00256 ppiD; Peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CKSOR_00109 surA; Chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CKSOR_00516 hypothetical protein K03671 TXN; thioredoxin D CKSOR_00073 grxD; Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin D CKSOR_00006 dsbA; Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] C 04131 Membrane trafficking [BR:kso04131] D CKSOR_00379 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CKSOR_00128 epd; D-erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CKSOR_00609 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:kso03051] D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:kso03032] D CKSOR_00577 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CKSOR_00339 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CKSOR_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CKSOR_00354 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CKSOR_00364 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00192 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CKSOR_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CKSOR_00435 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CKSOR_00176 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CKSOR_00322 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CKSOR_00576 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CKSOR_00139 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CKSOR_00312 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CKSOR_00540 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CKSOR_00415 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CKSOR_00003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CKSOR_00004 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:kso03036] D CKSOR_00439 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CKSOR_00339 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CKSOR_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CKSOR_00521 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CKSOR_00371 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D CKSOR_00550 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D CKSOR_00549 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CKSOR_00566 zapA; Cell division protein ZapA K09888 zapA; cell division protein ZapA D CKSOR_00066 zapD; Cell division protein ZapD K18778 zapD; cell division protein ZapD D CKSOR_00536 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CKSOR_00527 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CKSOR_00528 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CKSOR_00529 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor D CKSOR_00636 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CKSOR_00635 mreC; Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CKSOR_00634 hypothetical protein K03571 mreD; rod shape-determining protein MreD D CKSOR_00632 mrdB; Peptidoglycan glycosyltransferase MrdB K05837 rodA; rod shape determining protein RodA D CKSOR_00715 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CKSOR_00714 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CKSOR_00085 apbC; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CKSOR_00668 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:kso03400] D CKSOR_00642 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CKSOR_00459 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CKSOR_00067 thiE_1; Thiamine-phosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CKSOR_00219 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CKSOR_00463 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CKSOR_00165 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CKSOR_00095 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CKSOR_00641 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CKSOR_00269 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CKSOR_00288 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CKSOR_00462 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CKSOR_00532 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CKSOR_00663 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CKSOR_00236 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CKSOR_00182 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CKSOR_00225 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CKSOR_00703 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CKSOR_00702 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CKSOR_00670 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CKSOR_00265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CKSOR_00470 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CKSOR_00158 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CKSOR_00537 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CKSOR_00192 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CKSOR_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CKSOR_00435 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CKSOR_00176 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CKSOR_00322 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CKSOR_00576 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CKSOR_00139 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00203 recA; Protein RecA K03553 recA; recombination protein RecA D CKSOR_00524 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CKSOR_00525 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CKSOR_00523 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CKSOR_00057 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CKSOR_00332 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CKSOR_00437 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CKSOR_00141 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CKSOR_00510 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CKSOR_00415 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CKSOR_00003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CKSOR_00339 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CKSOR_00521 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CKSOR_00594 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CKSOR_00595 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:kso03029] D CKSOR_00395 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CKSOR_00218 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CKSOR_00304 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CKSOR_00698 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu D CKSOR_00699 fusA; Elongation factor G K02355 fusA; elongation factor G D CKSOR_00438 era; GTPase Era K03595 era; GTPase D CKSOR_00585 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CKSOR_00177 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CKSOR_00657 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CKSOR_00008 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CKSOR_00638 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CKSOR_00639 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CKSOR_00637 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CKSOR_00662 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CKSOR_00310 bamA; Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CKSOR_00506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CKSOR_00507 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D CKSOR_00105 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CKSOR_00106 groS3; 10 kDa chaperonin 3 K04078 groES; chaperonin GroES D CKSOR_00505 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CKSOR_00238 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CKSOR_00241 hscB; Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D CKSOR_00073 grxD; Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin D CKSOR_00085 apbC; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CKSOR_00717 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:kso02000] D CKSOR_00580 Putative multidrug export ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D CKSOR_00621 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CKSOR_00622 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CKSOR_00032 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CKSOR_00033 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CKSOR_00034 mlaF; putative phospholipid import ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CKSOR_00030 mlaC; putative phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CKSOR_00290 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D CKSOR_00291 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CKSOR_00028 yadH; Inner membrane transport permease YadH K01992 ABC-2.P; ABC-2 type transport system permease protein D CKSOR_00029 drrA; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CKSOR_00402 norM; Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump D CKSOR_00345 yibF; putative GST-like protein YibF K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CKSOR_00015 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A D CKSOR_00436 yccA; Modulator of FtsH protease YccA K19416 yccA; modulator of FtsH protease D CKSOR_00159 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D CKSOR_00286 ybdG; Miniconductance mechanosensitive channel YbdG K16053 ybdG; miniconductance mechanosensitive channel D CKSOR_00111 Magnesium transporter MgtE K06213 mgtE; magnesium transporter D CKSOR_00417 oprF; Outer membrane porin F K03286 TC.OOP; OmpA-OmpF porin, OOP family D CKSOR_00310 bamA; Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CKSOR_00374 bamB; Outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CKSOR_00422 bamD; Outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D CKSOR_00086 tamA; Translocation and assembly module TamA K07278 tamA; translocation and assembly module TamA D CKSOR_00087 tamB; Translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D CKSOR_00108 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D CKSOR_00504 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CKSOR_00390 zupT; Zinc transporter ZupT K16267 zipB; zinc and cadmium transporter D CKSOR_00503 emrE; Multidrug transporter EmrE K03297 emrE; small multidrug resistance pump D CKSOR_00130 pitA; Low-affinity inorganic phosphate transporter 1 K16322 pit; low-affinity inorganic phosphate transporter D CKSOR_00574 gltS; Sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CKSOR_00185 nhaP; Na(+)/H(+) antiporter NhaP K03316 nhaP; Na+:H+ antiporter D CKSOR_00271 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CKSOR_00319 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D CKSOR_00301 hypothetical protein K05595 marC; multiple antibiotic resistance protein D CKSOR_00330 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein D CKSOR_00570 pal; Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CKSOR_00569 tolB; Protein TolB K03641 tolB; TolB protein C 02044 Secretion system [BR:kso02044] D CKSOR_00547 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CKSOR_00121 hypothetical protein K03072 secD; preprotein translocase subunit SecD D CKSOR_00709 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CKSOR_00120 hypothetical protein K03074 secF; preprotein translocase subunit SecF D CKSOR_00487 hypothetical protein K03075 secG; preprotein translocase subunit SecG D CKSOR_00676 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CKSOR_00081 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CKSOR_00258 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CKSOR_00122 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D CKSOR_00717 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins C 02022 Two-component system [BR:kso02022] D CKSOR_00615 resE; Sensor histidine kinase ResE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D CKSOR_00614 spo0F; Sporulation initiation phosphotransferase F K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:kso04812] D CKSOR_00636 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CKSOR_00549 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CKSOR_00550 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D CKSOR_00527 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CKSOR_00528 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CKSOR_00529 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:kso04147] D CKSOR_00080 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CKSOR_00430 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CKSOR_00128 epd; D-erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CKSOR_00129 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CKSOR_00105 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CKSOR_00506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CKSOR_00328 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CKSOR_00698 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu D CKSOR_00017 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CKSOR_00272 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CKSOR_00350 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CKSOR_00522 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CKSOR_00285 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00424 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CKSOR_00406 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CKSOR_00488 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CKSOR_00609 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:kso02048] D CKSOR_00549 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CKSOR_00636 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CKSOR_00593 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CKSOR_00238 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:kso03100] D CKSOR_00116 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CKSOR_00562 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CKSOR_00170 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CKSOR_00155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CKSOR_00012 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CKSOR_00114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CKSOR_00514 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CKSOR_00098 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CKSOR_00115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CKSOR_00513 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CKSOR_00712 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CKSOR_00156 tRNA-His K14226 tRNA-His; tRNA His D CKSOR_00563 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CKSOR_00491 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00486 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CKSOR_00107 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CKSOR_00113 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CKSOR_00399 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00343 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00362 tRNA-Met K14230 tRNA-Met; tRNA Met D CKSOR_00070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CKSOR_00152 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CKSOR_00490 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00169 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00581 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00498 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CKSOR_00400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00711 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CKSOR_00710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CKSOR_00713 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CKSOR_00216 tRNA-Val K14237 tRNA-Val; tRNA Val D CKSOR_00338 tRNA-Val K14237 tRNA-Val; tRNA Val D CKSOR_00173 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CKSOR_00420 transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CKSOR_00433 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D CKSOR_00467 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CKSOR_00466 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CKSOR_00334 fpr_1; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CKSOR_00457 fpr_2; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CKSOR_00565 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CKSOR_00314 ppsR; Phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CKSOR_00292 yjjV; putative metal-dependent hydrolase YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CKSOR_00323 ycfH; putative metal-dependent hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CKSOR_00618 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CKSOR_00448 yceF; Maf-like protein YceF K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CKSOR_00083 tdcB; L-threonine dehydratase catabolic TdcB K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D CKSOR_00458 rsxB; Electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CKSOR_00456 fdxA; Ferredoxin-1 K05524 fdxA; ferredoxin D CKSOR_00239 iscU; Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D CKSOR_00407 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CKSOR_00619 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CKSOR_00751 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D CKSOR_00206 hypothetical protein K02498 hemY; HemY protein D CKSOR_00062 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D CKSOR_00276 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D CKSOR_00592 estB; Carboxylesterase 2 K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CKSOR_00275 cspE; Cold shock-like protein CspE K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D CKSOR_00231 tig; Trigger factor K03545 tig; trigger factor D CKSOR_00316 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CKSOR_00188 hypothetical protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CKSOR_00140 ybaB; Nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CKSOR_00485 Outer membrane porin protein K03285 TC.GBP; general bacterial porin, GBP family C 99978 Cell growth D CKSOR_00460 yciB; putative intracellular septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D CKSOR_00392 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CKSOR_00118 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D CKSOR_00031 mlaA; putative phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA D CKSOR_00311 skp; Chaperone protein Skp K06142 hlpA; outer membrane protein D CKSOR_00254 nlpD; Murein hydrolase activator NlpD K12943 ygeR; lipoprotein YgeR C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D CKSOR_00298 cvpA; Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D CKSOR_00587 erpA; Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein C 99997 Function unknown D CKSOR_00068 hypothetical protein K06923 K06923; uncharacterized protein D CKSOR_00647 hypothetical protein K06938 K06938; uncharacterized protein D CKSOR_00655 hypothetical protein K07018 K07018; uncharacterized protein D CKSOR_00346 hypothetical protein K07090 K07090; uncharacterized protein D CKSOR_00718 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D CKSOR_00653 hypothetical protein K09158 K09158; uncharacterized protein D CKSOR_00273 hypothetical protein K09791 K09791; uncharacterized protein D CKSOR_00318 rnfH; Protein RnfH K09801 K09801; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: December 2, 2024