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Transfer RNA Biogenesis - Erigeron canadensis (horseweed)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 122582435 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 122603143 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 122606836 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 122582211 protein GAMETOPHYTE DEFECTIVE 1 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 122594151 proteinaceous RNase P 1, chloroplastic/mitochondrial-like K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 122584693 proteinaceous RNase P 2 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 122598406 proteinaceous RNase P 1, chloroplastic/mitochondrial-like K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 122592741 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122586593 tRNase Z TRZ3, mitochondrial K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122587537 tRNase Z TRZ1-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122589076 tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122607209 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122607210 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122596129 intracellular ribonuclease LX-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122597242 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122597252 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122603214 pentatricopeptide repeat-containing protein At5g21222-like isoform X1 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 122611221 putative pentatricopeptide repeat-containing protein At2g02150 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 122600561 pentatricopeptide repeat-containing protein At2g18940, chloroplastic K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 122605215 tRNA-splicing endonuclease subunit Sen2-1-like K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 122596762 tRNA-splicing endonuclease subunit Sen2-1-like isoform X1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 122590798 tRNA-splicing endonuclease subunit Sen54-like isoform X1 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
C Other tRNA splicing factors
D 122593567 tRNA 2'-phosphotransferase 1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 122584280 maturase K K20000 MATK; maturase K
D 54108532 matK; maturase K K20000 MATK; maturase K
B tRNA transport factors
C tRNA export factors
D 122580405 GTP-binding nuclear protein Ran1A K07936 RAN; GTP-binding nuclear protein Ran
D 122580415 GTP-binding nuclear protein Ran1A K07936 RAN; GTP-binding nuclear protein Ran
D 122599496 GTP-binding nuclear protein Ran1A-like K07936 RAN; GTP-binding nuclear protein Ran
D 122599555 GTP-binding nuclear protein Ran1A-like K07936 RAN; GTP-binding nuclear protein Ran
D 122587405 exportin-T isoform X1 K14288 XPOT; exportin-T
D 122598831 protein EXPORTIN 1A-like K14290 XPO1; exportin-1
D 122587016 protein EXPORTIN 1A K14290 XPO1; exportin-1
D 122603386 protein HASTY 1 K14289 XPO5; exportin-5
D 122602748 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122603236 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 122603239 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 122594935 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122607192 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122607239 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122595131 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122596341 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122609057 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 122597189 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122598180 elongation factor 1-alpha-like isoform X1 K03231 EEF1A; elongation factor 1-alpha
D 122586014 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 122599226 elongation factor 1-alpha-like isoform X1 K03231 EEF1A; elongation factor 1-alpha
D 122599798 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122588782 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122602875 probable inactive serine/threonine-protein kinase scy1 K08876 SCYL1; SCY1-like protein 1
D 122589017 N-terminal kinase-like protein isoform X1 K08876 SCYL1; SCY1-like protein 1
C tRNA import factors
D 122578987 transportin MOS14 isoform X1 K15436 TRPO3; transportin-3
D 122588663 transportin MOS14 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 122581315 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 122584710 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 122603645 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122592870 proline--tRNA ligase, cytoplasmic-like K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122582006 proline--tRNA ligase, cytoplasmic-like isoform X1 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122583424 proline--tRNA ligase, cytoplasmic-like K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122595064 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 122599203 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 122595394 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 122610002 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 122590277 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122606764 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122596519 methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122585884 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 122600061 arginine--tRNA ligase, cytoplasmic-like isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 122607907 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122599495 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587183 lysine--tRNA ligase-like isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587184 lysine--tRNA ligase-like isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587528 uncharacterized protein LOC122587528 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587529 lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122589334 lysine--tRNA ligase, cytoplasmic-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122581952 aspartate--tRNA ligase 2, cytoplasmic-like K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 122596741 aspartate--tRNA ligase, chloroplastic/mitochondrial-like isoform X1 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 122603514 probable methionine--tRNA ligase isoform X1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
C Other AARSs
D 122590572 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 122598512 alanine--tRNA ligase, chloroplastic/mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 122602841 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122582583 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122598835 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122599420 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122585130 glycine--tRNA ligase, mitochondrial 1-like K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 122599698 glycine--tRNA ligase, mitochondrial 1-like K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 122595193 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122595244 threonine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122599321 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122609835 serine--tRNA ligase-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122597801 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122610960 serine--tRNA ligase-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122587132 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122579726 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122595824 cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122596782 cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122610215 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 122599127 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 122602694 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 122603738 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 122587012 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122600260 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122599953 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 122606815 tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122595893 tyrosine--tRNA ligase 1, cytoplasmic-like isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122583627 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122596465 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122600006 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122589371 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122578191 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 122603508 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 122582720 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122579014 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122611265 D-aminoacyl-tRNA deacylase-like isoform X1 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
B tRNA modification factors
C Deaminases
D 122593748 tRNA-specific adenosine deaminase TAD1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 122597854 tRNA-specific adenosine deaminase TAD2-like isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 122587750 tRNA-specific adenosine deaminase TAD2-like isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 122588500 tRNA-specific adenosine deaminase TAD3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 122578412 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 122579611 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 122587446 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 122603464 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 122585950 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
C Methylthiotransferase
D 122608470 threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 122603571 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 isoform X1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 122605375 tRNA (guanine(26)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 122587070 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 122607197 zinc finger CCCH domain-containing protein 24 K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 122584195 uncharacterized protein LOC122584195 isoform X1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 122610056 RNA cytosine-C(5)-methyltransferase NSUN2-like K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D 122595821 rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X1 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 122592755 tRNA (guanine(37)-N1)-methyltransferase 1 isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 122596138 tRNA (guanine(37)-N1)-methyltransferase 2 isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 122589202 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 122605071 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 122592787 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 122605082 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 122593177 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 122606148 tRNA N(3)-methylcytidine methyltransferase METTL6 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 122606464 uncharacterized methyltransferase C3H7.11-like isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 122596003 uncharacterized protein LOC122596003 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 122607435 tRNA (carboxymethyluridine(34)-5-O)-methyltransferase K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 122584729 alkylated DNA repair protein ALKBH8 homolog K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 122588532 tRNA (guanine(9)-N1)-methyltransferase K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 122600225 tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 122593419 tRNA:m(4)X modification enzyme TRM13 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 122592915 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 122605164 multifunctional methyltransferase subunit TRM112 homolog A-like K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 122585786 tRNA (cytosine(38)-C(5))-methyltransferase 2 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 122593395 tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 122608327 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 122593908 tRNA wybutosine-synthesizing protein 2/3/4 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 122599229 leucine carboxyl methyltransferase 1 homolog isoform X1 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 122599607 leucine carboxyl methyltransferase 1 homolog K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
C Psudouridine synthases
D 122604069 tRNA pseudouridine synthase A-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122605640 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122608268 putative tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122609392 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122585105 tRNA pseudouridine synthase A 1 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122607857 tRNA pseudouridine(38/39) synthase K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 122588596 uncharacterized protein LOC122588596 isoform X1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 122588493 multisubstrate pseudouridine synthase 7 isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 122603706 tRNA pseudouridine synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D 122603811 tRNA-specific 2-thiouridylase MnmA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 122578740 cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 122593045 cytoplasmic tRNA 2-thiolation protein 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 122596440 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 122593834 ubiquitin-related modifier 1 homolog 1-like K12161 URM1; ubiquitin related modifier 1
D 122611214 adenylyltransferase and sulfurtransferase MOCS3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 122582245 EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 122578678 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 122596073 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 122596735 EKC/KEOPS complex subunit TPRKB K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 122589668 uncharacterized protein LOC122589668 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D 122585191 uncharacterized protein LOC122585191 isoform X1 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D 122585247 elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 122605673 elongator complex protein 2 K11374 ELP2; elongator complex protein 2
D 122606964 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 122583308 elongator complex protein 4 K11375 ELP4; elongator complex protein 4
D 122580029 elongator complex protein 5 K11376 ELP5; elongator complex protein 5
D 122584663 elongator complex protein 6 isoform X1 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 122580058 diphthamide biosynthesis protein 3 K15455 DPH3; diphthamide biosynthesis protein 3
D 122578631 protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 122582633 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 122581837 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 122599571 tRNA dimethylallyltransferase 9 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 122578985 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 122600983 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 122607471 queuine tRNA-ribosyltransferase catalytic subunit 1-like K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 122606702 queuine tRNA-ribosyltransferase accessory subunit 2-like K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 122598847 tRNA A64-2'-O-ribosylphosphate transferase isoform X1 K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D 122603432 THUMP domain-containing protein 1 K06963 TAN1; tRNA acetyltransferase TAN1
D 122595645 tRNA(His) guanylyltransferase 1-like isoform X1 K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 122604015 arginyl-tRNA--protein transferase 2-like K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D 122595631 terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 122595620 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 122596645 DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 122611171 5'-3' exoribonuclease 3 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 122592608 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 122595564 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 122595816 putative PAP-specific phosphatase, mitochondrial K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 122592741 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122586593 tRNase Z TRZ3, mitochondrial K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122587537 tRNase Z TRZ1-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122589076 tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 122593233 ribonuclease II, chloroplastic/mitochondrial K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D 122607209 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122607210 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122596129 intracellular ribonuclease LX-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122597242 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122597252 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 122595394 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 122610002 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 122603645 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122592870 proline--tRNA ligase, cytoplasmic-like K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122582006 proline--tRNA ligase, cytoplasmic-like isoform X1 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122583424 proline--tRNA ligase, cytoplasmic-like K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 122606815 tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122595893 tyrosine--tRNA ligase 1, cytoplasmic-like isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122583627 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122596465 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122600006 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122589371 tyrosine--tRNA ligase 1, cytoplasmic-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122578191 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 122603508 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 122595193 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122595244 threonine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122599321 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 122595064 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 122599203 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 122607907 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122599495 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587183 lysine--tRNA ligase-like isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587184 lysine--tRNA ligase-like isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587528 uncharacterized protein LOC122587528 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122587529 lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122589334 lysine--tRNA ligase, cytoplasmic-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122590572 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 122598512 alanine--tRNA ligase, chloroplastic/mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 122610215 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 122599127 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 122590277 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122606764 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122596519 methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 122609835 serine--tRNA ligase-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122597801 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122610960 serine--tRNA ligase-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122587132 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 122596741 aspartate--tRNA ligase, chloroplastic/mitochondrial-like isoform X1 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 122595948 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 122579726 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122595824 cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122596782 cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122581315 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 122584710 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 122585884 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 122600061 arginine--tRNA ligase, cytoplasmic-like isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 122587012 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122600260 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122599953 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 122602694 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 122603738 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 122602841 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122582583 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122598835 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122599420 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 122582720 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122579014 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122611265 D-aminoacyl-tRNA deacylase-like isoform X1 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
B tRNA modification factors
C Deaminases
D 122595550 tRNA(adenine(34)) deaminase, chloroplastic K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D 122583167 tRNA(adenine(34)) deaminase, chloroplastic-like isoform X1 K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D 122581211 tRNA-dihydrouridine(20/20a) synthase-like isoform X1 K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D 122605082 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 122593177 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 122578985 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 122582037 putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D 122593395 tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 122588754 uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D 122604069 tRNA pseudouridine synthase A-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122605640 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122608268 putative tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122609392 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122585105 tRNA pseudouridine synthase A 1 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 122588596 uncharacterized protein LOC122588596 isoform X1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 122588493 multisubstrate pseudouridine synthase 7 isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 122596440 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 122582245 EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 122578678 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 122596073 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 122600983 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 122581837 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 122599571 tRNA dimethylallyltransferase 9 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 122582633 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 122599060 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C 122603169 polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 122578869 polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024