Zingiber officinale (ginger): 122001121
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Entry
122001121 CDS
T08725
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122001121
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122001121
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122001121
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
122001121
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122001121
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122001121
Prokaryotic type
122001121
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
122001121
NCBI-ProteinID:
XP_042411640
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Position
7A:complement(20407862..20420970)
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AA seq
411 aa
AA seq
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MSRALLSQFLNVSFASPRLSASIIDRGQYLRRVGIPSRAVVADFSCDCSASASAPAPATE
APGLSPSPSKKRVVSGVQPTGSVHLGNYLGAIKNWVLLQDTYDTFFFIVDLHAITLPYDA
SELSKATRSTAALYLACGIDPSKASVFLQSHVRAHVELMWLLSSVTPLGWLNRMIQFKEK
SRMAGDENVGVALLTYPVLMASDILLYQTDLVPVGEDQKQHLELTRELAERVNYLYGGRK
WKKLGGRGGMLFKVPEAFIPPTGARVMSLTDGLSKMSKSSPSDQSRINLLDTKDVIANKI
KRCKTDSFTGMEFDNPERPECNNLLSIYQLVTGKTKEEVENECQNMNWGTFKAILTDAVV
DHLHPIQVRYSEITTDPTYLDHILSEGAKKAADIAEITLSNVYQAMGFLKR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgctcttctctctcaatttctcaacgtttcctttgcctctccgcgactatcc
gcatcgattatcgaccgtggtcagtatttgaggagagtaggcatcccgtctcgtgcagtg
gttgctgatttcagttgcgactgcagtgcttccgcttccgctcctgctcctgctacagag
gctccggggctttctcccagtccatccaagaaaagagttgtttctggggtacaacccaca
ggatctgtacaccttggaaactatcttggtgcaataaaaaattgggttctacttcaggat
acttatgatacattcttcttcatcgtagacttgcatgcgatcactctaccatatgatgcc
tcagaattgtctaaagcaacaagaagtacagcagcattatatttggcttgtggtatcgat
ccatccaaggcttctgtatttttgcaatctcatgttcgtgctcatgtggagttgatgtgg
ctgctcagttctgtcacaccacttggctggttgaataggatgatccaatttaaagaaaaa
tctcggatggcgggtgatgagaatgtaggagttgcacttttaacttatccagttctgatg
gcttcagatattctgttgtaccagactgatttggtacctgttggtgaggatcagaaacaa
catttggaacttactcgtgaattagctgaaagagtaaattatttgtatggaggaaggaaa
tggaagaaattgggagggagaggtggtatgttattcaaggttcctgaagcctttattcca
ccaacaggggctcgggttatgtcactcacagatggtctttcaaagatgtcgaagtcttcg
ccttctgatcagtctcgcatcaatcttcttgacacaaaagatgtgattgctaacaagatc
aaacgctgcaaaaccgactcattcacggggatggagtttgataatcctgaaagacctgaa
tgcaataatcttttatctatctatcagcttgtaactgggaagaccaaagaggaagtcgaa
aatgaatgccaaaatatgaactggggaacattcaaggcaatcctcacagatgctgtggtg
gatcatctgcatccaatccaggtacggtattcagagattactactgatccaacatatttg
gatcatattttgtcagagggtgctaaaaaagcagctgacatagcggaaatcactctcagc
aatgtctaccaggccatggggttcttgaagagatag
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