Xenorhabdus nematophila ATCC 19061: XNC1_3914
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Entry
XNC1_3914 CDS
T01274
Symbol
ssb
Name
(GenBank) ssDNA-binding protein controls activity of RecBCD nuclease
KO
K03111
single-strand DNA-binding protein
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03030
DNA replication
xne03430
Mismatch repair
xne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XNC1_3914 (ssb)
03430 Mismatch repair
XNC1_3914 (ssb)
03440 Homologous recombination
XNC1_3914 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xne03032
]
XNC1_3914 (ssb)
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_3914 (ssb)
03029 Mitochondrial biogenesis [BR:
xne03029
]
XNC1_3914 (ssb)
DNA replication proteins [BR:
xne03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XNC1_3914 (ssb)
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
XNC1_3914 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
XNC1_3914 (ssb)
Mitochondrial biogenesis [BR:
xne03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
XNC1_3914 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBJ91942
UniProt:
D3VBV3
LinkDB
All DBs
Position
complement(3776747..3777262)
Genome browser
AA seq
171 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMREKTEWHRVVI
FGKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQSGQDRYTTEIVVNIGGTMQMLGGRGGAG
QEAPAQAGWGQPQQPQASQQFSGGGAPSRPAPSPAPQSNEPPIDFDDDIPF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagaggcgtaaacaaagttattttagtgggtaatttgggacaggacccagaa
gttcgttatatgccgaacgggggagcagtcgccaacattactctggcaacgtctgagagc
tggcgtgataagcaaaccggtgagatgagagagaaaaccgaatggcatcgtgttgtgatt
ttcggcaaactggcagaagtcgccggtgaatatctgcgcaaaggctctcaggtttatatc
gaaggttctttgcagactcgtaaatggcaggatcagagcggtcaggatcgttacaccact
gaaatcgtggtcaatattggtggcaccatgcagatgttgggcggtcgcggtggtgcaggg
caggaagcaccggcacaagcgggttggggccagcctcaacagccacaggcatctcagcaa
ttcagcggtggtggtgcaccatctcgtccggcaccgtctcctgcgccacagagcaatgaa
ccaccaatcgattttgatgatgacattccgttctag
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