Xanthomonas campestris pv. raphani: XCR_0419
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Entry
XCR_0419 CDS
T01872
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00330
Arginine and proline metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
XCR_0419 (speA)
Enzymes [BR:
xcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
XCR_0419 (speA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AEL05345
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Position
445565..447451
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AA seq
628 aa
AA seq
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MSDWSLDQARKTYSIPHWADGYFDVNDAGHVVVRPTADGPAVSLPEVVDAARAAGAKLPL
LVRFPDILGQRLGKLQAAFAQAQADWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGFGL
EAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLVLE
EARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKSLRDTEYADSLNL
LHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYCSI
NYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGRVP
DAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEGLSAYALGQIDLTHRARIDDLF
YAIAHGVRARLSFDEKSHRPVLDELNERLVDKYFVNFSVFESIPDVWAIDQVFPIVPIER
LNEAPQRRGIIADMTCDSDGMVKTYVENESLDSSLPLHGLNPGESYRIGFFLVGAYQEIL
GDIHNLFGDTDAVEVAVDGTGYRIAQQRRGDTTDVMLDYVGYQLDTLRATYAERIAAAQL
PPERAQEVHDALEAGLTGYTYLSDEPLG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggtccctcgaccaagcccgcaagacctactcgatcccgcattgggccgat
gggtatttcgatgtgaacgacgccggccatgtggtggtcagaccgaccgccgacggccct
gcggtgtcgctgcccgaagtggtggatgccgcgcgtgcggccggcgccaagctgccgctg
ctggtgcgcttcccggacatcctgggccagcgcctgggcaagctgcaggcggcgttcgcc
caggcccaggccgattgggactacgccggtggttacaccgcggtgtatccgatcaaggtc
aaccagcaccgcggcgtggccggcacgctggccagccaccacggcgagggcttcggcctg
gaagcgggcagcaagcccgagctgatggcggtgctggcactgtcgcgtccgggtgggctg
atcgtctgcaacggctacaaggatcgcgagtacatccgcctggcgctgatcgggcgcaag
ctcggcctgcagaccttcatcgtcatcgaaaagccctccgagctgaacctggtgctggaa
gaggcgcgcgcgctggacgtcaagccgggcctgggcgtgcgcatgcggctggcgtcgctg
ggcgcgggcaagtggcagaacagcggtggcgacaaggccaagtttgggctgtcgccgcgc
caggtgctggacctgtggaagtcgctgcgcgacaccgaatacgccgacagcctgaacctg
ctgcatttccatatgggctcgcagatttccaacgtgcgcgacatcgccaacggcatgcgc
gaggccacccgctatttcgtggagctctcgcgcctgggcgcgaagatcagccatgtggac
gtgggcggcggcctgggcatcgactacgaaggcacgcgttcgcgcagctattgctcgatc
aattacggcctgcattcgtatgccagcaacatcgtgcagccgctggccagtgcctgcgaa
gagcacggcctgccgccgccgcgcatcgtcaccgaatgcggccgcgcgatgactgcgcac
cacgcggtgctgatcgccaacgtctcggaagtggagcaggcgccggaaggccgtgtgccg
gatgcgcacgacgacgagccggcggcgatccgtcacctgcgcgagatccacgacgagctc
gatgtgcgcccggcggtggaactgttccaggaagcgcagcacttccatgccgaagggctg
agcgcctacgcgttgggccagatcgatctaacccaccgtgcgcgcatcgacgacctgttc
tacgccatcgcccacggcgtgcgtgcgcgcctgagcttcgacgaaaagagccatcgcccg
gtgctggacgagctcaacgagcggctggtggacaaatacttcgtcaacttcagcgtgttc
gaatcgattccggatgtgtgggcgatcgatcaggtcttcccgatcgtgccgatcgagcgc
ctgaacgaggccccgcagcggcgcggcatcatcgccgacatgacctgcgattccgacggc
atggtcaagacctacgtcgagaacgaaagcctggacagctcgctgccattgcatggcttg
aaccccggcgagagctatcgcattggcttcttcctggtgggtgcctaccaggaaatcctg
ggcgacatccataacctgttcggcgataccgatgcggtggaagtggcggtggacggcacc
ggctaccgcatcgcgcagcagcgtcgcggcgacaccaccgatgtgatgctcgactacgtg
ggctatcagctggacaccctgcgtgccacctatgccgaacgtatcgccgcggcacagctg
ccacccgagcgcgcgcaggaagtgcacgacgcgctggaagccggcctgaccggctacacc
tatctgtccgacgaaccgttgggctga
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