Aliivibrio salmonicida: VSAL_I0461
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Entry
VSAL_I0461 CDS
T00782
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
vsa
Aliivibrio salmonicida
Pathway
vsa03030
DNA replication
vsa03430
Mismatch repair
vsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSAL_I0461 (ssb)
03430 Mismatch repair
VSAL_I0461 (ssb)
03440 Homologous recombination
VSAL_I0461 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_I0461 (ssb)
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_I0461 (ssb)
03029 Mitochondrial biogenesis [BR:
vsa03029
]
VSAL_I0461 (ssb)
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VSAL_I0461 (ssb)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
VSAL_I0461 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
VSAL_I0461 (ssb)
Mitochondrial biogenesis [BR:
vsa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
VSAL_I0461 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
CCDC53
TFIIA
Motif
Other DBs
NCBI-ProteinID:
CAQ78146
UniProt:
B6EM65
LinkDB
All DBs
Position
1:517928..518479
Genome browser
AA seq
183 aa
AA seq
DB search
MASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVAL
FGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQG
QGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQQAPQAAQPQYNEPPMDFDDD
IPF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgtggtattaataaagttatccttgttggtaacttagggcaagatcctgaa
atccgttacatgccaagtggcggtgcggtagcaaacattacaattgcaacgtcggaatca
tggcgtgataaagcaactggcgaacaacgtgaaaaaacagaatggcaccgtgttgctctg
tttggtaaattagcggaagttgctggtgagtatttacgtaaaggctctcaagtttatgtt
gaaggtcaattacaaacacgtaaatggcaagatcagagcggtcaagatcgttttactaca
gaagttgtagttcaaggttttaacggtgtaatgcagatgcttggtggtcgtggtcaaggt
caaggcgctccagctggtggacagcagcaacagcagcaaggcaattggggtcaacctcaa
caacctgcgcagcaaaataactttgctccacaacagcagcaacaacaagcacctcaacaa
caagcaccgcaggcagctcagcctcaatataatgagccaccaatggactttgatgatgat
attccattttag
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integrated database retrieval system
