Varibaculum cambriense: CYK25_007040
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Entry
CYK25_007040 CDS
T09090
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYK25_007040 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcb01007
]
CYK25_007040 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcb03016
]
CYK25_007040 (trpS)
Enzymes [BR:
vcb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
CYK25_007040 (trpS)
Amino acid related enzymes [BR:
vcb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CYK25_007040 (trpS)
Transfer RNA biogenesis [BR:
vcb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CYK25_007040 (trpS)
Prokaryotic type
CYK25_007040 (trpS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
WIK89625
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All DBs
Position
1517922..1519025
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AA seq
367 aa
AA seq
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MSDSGEKLENSTDAASLKRAELKSQEIEAAIDKDPSKFRVLSGDRPTGALHLGHYFGTIK
NRVEIQKRGVETWILIADYQVITDREGTGPIRERVLNMLADYIACGLDPEKTTIFTHSSV
PAANQLMLPFLSLVTEAELHRNPTVKAELEASERPMSGLLLTYPVHQAADILFCKANLVP
VGKDQLPHLEQARVISDRFERVFRRKSSLKHRVFPRPEGLLSGDGALILGLDGEKMSKSR
GNTVELGMTSDETAKLIKRAKTDAERQITYDPENRPEVSNLLRLAGLASGQDPRALAEEI
GDQGAGKLKQVLTEALDSALSPIRARRAELLADPGYLWQVLERGNQRANEVADQTLAEVR
QAMNMVY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagcggcgagaaactagaaaattccactgatgcggcttctttgaagcgtgcg
gagctgaaatctcaagagattgaggcagcgattgataaggatccttccaagttccgggta
ctctccggggatcgcccgactggcgccctgcacttgggacattactttgggacgattaag
aatcgggtagagatccaaaagcgcggggtggaaacttggattctgattgctgactaccag
gtaatcactgaccgcgagggtactggcccgatccgcgagcgtgtcctcaatatgctcgct
gactacattgcttgcggcctcgatccggaaaagaccacgattttcacgcactcatcggtg
ccggcagctaaccagttaatgttgccattcctgtcgttggttacggaggcggagctgcac
cgcaaccccacggtgaaggcagaactggaggcttcggagcggccgatgtcgggattgttg
ctgacttacccggtgcatcaggcggccgatattttgttctgtaaagcgaacctggtgccg
gtgggtaaagatcaactcccccacttggagcaggcacgggtaatttcggatcgtttcgag
cgggttttccggcgtaagtcttccttgaagcatcgggtgttcccgcgtccggagggcttg
ctttctggtgatggcgccctgattttggggttggatggcgaaaaaatgtcgaagtcgcgc
ggtaacacggtagaactgggaatgaccagtgacgaaactgcgaagttgattaaacgcgcc
aagactgatgccgagcgccagattacttatgatccggagaatcgccccgaggtttcgaac
ctgttacggctggccggcctggctagtggacaggatccgcgcgcgttggccgaggaaatc
ggggatcagggggcaggaaagctaaaacaggtgctcaccgaggctttagatagtgctctg
tctccgattagggcgcggcgcgctgaactattggctgaccctggttatttgtggcaggta
ctagagcgcggtaaccaacgcgccaatgaggtagctgaccagaccttggcggaagttcgc
caggcgatgaatatggtttactag
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