Trachemys scripta elegans (red-eared slider): 117881007
Help
Entry
117881007 CDS
T07347
Name
(RefSeq) 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
KO
K04628
ceramide galactosyltransferase [EC:
2.4.1.47
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00565
Ether lipid metabolism
tst00600
Sphingolipid metabolism
tst01100
Metabolic pathways
Module
tst_M00067
Sulfoglycolipids biosynthesis, ceramide/1-alkyl-2-acylglycerol => sulfatide/seminolipid
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
117881007
00600 Sphingolipid metabolism
117881007
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117881007
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.47 N-acylsphingosine galactosyltransferase
117881007
Glycosyltransferases [BR:
tst01003
]
Glycolipid biosynthesis
Glycosphingolipid
117881007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDPGT
EryCIII-like_C
Glyco_tran_28_C
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
117881007
NCBI-ProteinID:
XP_034633649
LinkDB
All DBs
Position
7:complement(56814045..56837919)
Genome browser
AA seq
531 aa
AA seq
DB search
MEMRLPPHPVAVLLMVAAFSLDCCHGAKVLVMPTIVFDSHLRVFMRVAEALNDRGHNATL
LLHEGRESEPFLPGLRVQTYRGIFSTESADAWVQEKIKRVFQGKKTSLEIFSFLEKYLEN
CDLVLGDAALLQQLQGEGFDLFLVDPNEMCGFILAHLLGVKYAVISTGFWYPAEIGATSP
VAYVPEFNSLMTDRMGLVGRTWNLLVYVITRIATKLVILPKFDRLMQKHGVEPQKSMLEL
VYGTSLFFLCNDVVLDFPRPTLPHVIFTGGILAEPEKPLPVGLRRWVEAADAGVVVVSFG
IGIRALPSNLVEKMAGAFARLPQRVVWRYFGQKPNNLGENTLMMEWLPQNDLLGHSNVKA
FISHCGMNGIFEAIYHGVPVVGFPFYGDQFDIMTRVQAKGMGILMDWSRVSEEDLYQAIV
TVLSNPSYNKAAKQISALHRDTPMHALNRTVYWLEYILRHDGAPYLRPAVYDLSFYEYFC
LDILALFLLCLACVAYALYKAIVWYWGKSASPMHLNGNCLNGHLMEGKKAQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaggctcccgccgcaccccgttgcggtcctcctcatggtggccgctttcagt
ctggactgttgccatggtgccaaagtgctggtgatgcccaccatcgtctttgacagccac
cttcgggtcttcatgcgggtggcggaggcactgaatgaccggggtcacaacgccacactt
ctcctccacgagggtcgggaatccgagcccttcctgccaggcctccgagtgcaaacgtac
agggggatcttcagcacggagagcgcggacgcctgggtgcaggagaagataaagcgtgtc
ttccaggggaagaagacttccctggagatcttctccttcctggaaaagtacttggaaaac
tgtgatctagtgctgggggatgcagccctcctgcagcagctccagggtgagggctttgac
ttgttcttggtagaccccaatgagatgtgtggcttcattctggcccacctccttggtgtc
aaatacgccgtgatctccaccggcttctggtacccagctgagatcggcgccacttccccc
gtcgcctatgtccccgagttcaactctctgatgacggacaggatggggctggtgggccgg
acttggaatctcctggtctacgtgatcactcgcatcgccaccaagctggtcatcctgccc
aagttcgaccgcctcatgcagaaacacggggtggagccgcagaagtccatgctggagctt
gtctatgggaccagcctcttcttcctgtgcaacgatgtggtgctagactttcccaggccc
acgctcccccatgtcattttcactgggggaatcctcgctgagcctgaaaagccccttcct
gtgggcctgcgccgctgggtggaagctgcggatgctggtgttgtcgtcgtctcctttggc
attgggatccgagcgctcccgagcaacttggtggagaagatggctggggcgtttgcacgc
cttcctcagagggtcgtgtggagatactttggtcagaagccaaataacctgggtgagaat
acgctgatgatggagtggctgccccagaacgacctgctgggtcactccaacgtgaaagcc
ttcatcagccactgtgggatgaatggcatattcgaagcaatttatcacggagtgccagtt
gtggggttccctttctatggggaccagttcgacatcatgacaagagttcaggcaaaaggg
atggggattctcatggactggagccgagtaagcgaagaggacctttaccaggccatagtc
accgttctctccaaccccagctacaataaagcagccaagcagatctcagccctgcaccga
gacacgcctatgcacgctctgaaccgcacggtgtactggctggagtacatcctccgccac
gacggggcaccgtaccttcgcccagccgtctacgacctctccttctacgagtacttctgc
ctggacatccttgctctcttccttctctgtctggcgtgtgttgcctatgccctgtacaaa
gccattgtgtggtactggggaaagagtgccagtcccatgcatctgaacggcaactgtctg
aatggccatctgatggaggggaagaaggcgcagtag
DBGET
integrated database retrieval system
