Shinella sumterensis: Q9314_09245
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Entry
Q9314_09245 CDS
T09417
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Q9314_09245 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssum01007
]
Q9314_09245 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssum03016
]
Q9314_09245 (trpS)
Enzymes [BR:
ssum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
Q9314_09245 (trpS)
Amino acid related enzymes [BR:
ssum01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Q9314_09245 (trpS)
Transfer RNA biogenesis [BR:
ssum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Q9314_09245 (trpS)
Prokaryotic type
Q9314_09245 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WLS09925
LinkDB
All DBs
Position
complement(1822544..1823611)
Genome browser
AA seq
355 aa
AA seq
DB search
MSAFKPLVFSGVQPTGNLHLGNYLGAIRKFVALQDDNDCIYCVVDLHAITAQLVHEDMRG
QIRSIAAAFIAAGIDPKKHIVFNQSAVPQHAELAWIFNCVARIGWMERMTQFKDKTGGKN
AEQVSLGLLAYPSLMAADILVYRATHVPVGDDQKQHLELTRDIAQKFNIDFGNHIRKAGT
GVDIVVGEEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMSKSDASDLSRINLTDDAETIS
KKIRKAKTDPDALPSEVEGLKGRPEADNLVGIYAALADKTKADVLAEFGGQQFSAFKPAL
VDLAVNVLSPITDEMRRLMDDTSHIDAILRDGGERARARAEKTMKEVRDIVGFVQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattcaagcccctcgtcttctccggcgtgcagccgaccggcaatctccacctc
ggcaactatctcggcgcgatccgcaagttcgtggcgctgcaggacgataacgactgcatc
tattgcgtcgtggacctgcacgccattaccgcgcagctggtgcacgaggatatgcgcggc
cagatccgctcgattgccgccgccttcattgccgccggcatcgatccgaagaagcacatc
gtcttcaaccagtccgccgtgccgcagcacgccgagctcgcctggatattcaactgcgtg
gcgcgcatcggctggatggagcgcatgacccagttcaaggacaagaccggcggcaagaat
gccgaacaggtctcgctcggcctgcttgcctatccaagcctgatggccgccgacatcctc
gtctaccgcgcgacccatgtgcccgtcggcgacgaccagaagcagcacctggagctgacc
cgcgacatcgcgcagaagttcaacatcgacttcggcaatcacatccgaaaggccggcacc
ggcgtcgatatcgtggtcggcgaggagccggtgcacgcctatttcccgatggtcgagccg
ctgatcggcggaccggcaccgcgcgtcatgagcttgcgcgacggtacgaagaagatgtcg
aagtccgatgcctccgacctgtcgcgcatcaacctcaccgacgatgccgagacgatctcc
aagaagatccgcaaggccaagaccgatccggacgccttgccgagcgaggtcgagggcctg
aagggacgccccgaggcggacaacctcgtcggcatctatgcggcccttgccgacaagacc
aaggccgacgttctcgccgagttcggcggccagcagttctcggccttcaagccggcgctg
gtcgaccttgccgtcaacgttctctcgccgatcaccgacgagatgcgccgcctgatggac
gacacgagccatatcgacgccatcctgcgcgatggtggcgaaagggcacgcgcccgggcc
gaaaaaaccatgaaggaagtccgcgacatcgtcggttttgtgcagtaa
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