Sphingomonas sediminicola: H9L14_07580
Help
Entry
H9L14_07580 CDS
T07077
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H9L14_07580 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssed01007
]
H9L14_07580 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssed03016
]
H9L14_07580 (trpS)
Enzymes [BR:
ssed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
H9L14_07580 (trpS)
Amino acid related enzymes [BR:
ssed01007
]
Aminoacyl-tRNA synthetase
Class I (G)
H9L14_07580 (trpS)
Transfer RNA biogenesis [BR:
ssed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H9L14_07580 (trpS)
Prokaryotic type
H9L14_07580 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QNP44677
LinkDB
All DBs
Position
1408216..1409211
Genome browser
AA seq
331 aa
AA seq
DB search
MRVVSGIQPTGGLHLGNLLGAILRWVRMQEEAECLFFLADLHALTIDVDPQELRSNIREM
AAALIASGIDPKKSILFQQSAIPAHAELAWILQCTARVGWLNRMTQFKEKSGKSREGASV
GLYTYPVLQAADVLLYRATHVPVGEDQKQHLELARDIAIKFNTDYDVELFVPPEPYIPAG
AAARIMSLRDGSAKMSKSDPSDMSRINLTDSDDQISQKIRKAKTDPEPLPDDPALLDGRP
EAKNLVGIYSAVTGESVEQVLSRFAGQGFGAFKPALADALVALLHPLRSRLEELRNDPAE
LDRLLADGSARAASLGQPVLKQAYSAVGLPR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcgtttcgggtatccagccgactggcgggcttcacctcggcaacctgctgggc
gccattctgcgctgggtccggatgcaggaagaggccgagtgcctgttcttcctcgccgat
cttcacgcgctgacgatcgacgtcgatccgcaggagcttcgttcgaacatccgcgagatg
gcggcagcgttgatcgccagcgggatcgatccaaagaagtcgatccttttccagcaaagc
gcgatcccggcccatgcggagctagcctggatcctccagtgcaccgctcgtgtcggctgg
ctgaatcgaatgacgcagttcaaggagaagtccggcaagtcgcgagaaggcgccagcgtc
ggtctctacacctatccggtcctgcaagccgcggacgtgctgctctatcgcgccacgcac
gtgccggtcggcgaggaccagaagcagcatctggagctggcccgcgacatcgcgatcaag
ttcaacaccgattacgatgtggagctgttcgtgccgcccgaaccgtacatcccggccggg
gccgcggctcgcatcatgagccttcgtgacggatcggcgaagatgtccaaatccgacccg
tcggacatgagccgcatcaacctgaccgacagcgacgaccagatttcgcagaagatccgc
aaggccaagaccgatccggagccgcttcccgacgatccagctctgctggatggacggccc
gaagcgaagaacctcgttggaatttacagcgcagtgaccggtgagtccgtcgaacaagtc
ctgtcgcgatttgccggccagggcttcggcgcgttcaagccggcgcttgccgacgcgctc
gtggccctgctgcacccgctgcgctcgcggctcgaagaactgcgcaacgatccggctgag
ctggatcggctgcttgctgacggctccgcgcgcgcggcctcgctcggccagcccgttctg
aagcaggcttacagcgcggtcggcctgccgcgctga
DBGET
integrated database retrieval system
