Serratia plymuthica 4Rx13: SOD_c43990
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Entry
SOD_c43990 CDS
T02710
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase TrpS
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOD_c43990 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c43990 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c43990 (trpS)
Enzymes [BR:
srl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SOD_c43990 (trpS)
Amino acid related enzymes [BR:
srl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SOD_c43990 (trpS)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOD_c43990 (trpS)
Prokaryotic type
SOD_c43990 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AGO57342
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All DBs
Position
complement(4940955..4941959)
Genome browser
AA seq
334 aa
AA seq
DB search
MSKPIVFSGAQPSGELSIGNYMGALRQWVKLQDDYDCIYCIVDLHAITVRQDAEKLRKAT
LDTLALYLACGIDPQKSTIFVQSHVPEHTQLSWVLNCYTYFGELSRMTQFKDKSARYAEN
INAGLFSYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIGQRFNALYGDVFKVPEPFIP
KSGARVMSLQDPTKKMSKSDDNRNNVIGLLEDPKAVAKKIKRAMTDSEEPPVIRYDVANK
PGVSNLLDILSGVTGKSIAQLEAEFEGQMYGHLKGAVADAVSGMLGELQERYHNFRNDEA
LLQQVMRDGAAKARARAQETLAKVYQAVGFVSQP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcccatcgtatttagcggcgcgcagccgtccggtgaactgagcattggcaac
tacatgggtgcgctgcgtcagtgggttaagctgcaggacgattacgactgcatctactgc
atcgtcgatctgcacgccatcaccgtacgtcaggacgcggaaaaactgcgcaaggctacg
ctggatacgctggcgctgtacctggcctgcggcatcgatccgcaaaagagcaccatcttt
gtgcagtcgcacgtgccggaacacactcaactgagctgggtgctgaactgctacacctat
ttcggcgagctgagccgcatgacccagttcaaagacaaatccgcgcgctatgcggaaaac
atcaatgccggtctgttcagctacccggtgctgatggcggcggacattctgctgtatcag
accaaccaggtgccggtcggcgaagaccagaagcagcatctggaattgagccgtgacatc
ggccagcgtttcaacgcgctgtatggcgatgtgttcaaggtgcctgagccgttcattccc
aagtctggcgcgcgcgtgatgtcgttgcaggatccgaccaagaagatgtccaagtcggac
gataaccgtaataacgtgatcggcctgttggaagatccgaaagcggtggccaagaaaatc
aagcgcgcgatgaccgactccgaagagccgccggtgattcgttacgacgtggcgaacaag
ccgggtgtgtccaacctgctggatattctctcgggtgtgaccggcaaaagcatcgctcag
ttggaagccgaatttgaaggccagatgtacggccacctgaaaggcgcagttgccgacgcg
gtatccggtatgctgggtgagttgcaggagcgttatcacaacttccgcaatgacgaggcc
ttgctgcagcaggtcatgcgcgacggtgcggccaaggcgcgcgcgcgcgctcaggaaacg
ctggcgaaggtttaccaggcggtaggcttcgtatcgcagccgtaa
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