Sphingopyxis sp. 113P3: LH20_16590
Help
Entry
LH20_16590 CDS
T04069
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00300
Lysine biosynthesis
sphp00470
D-Amino acid metabolism
sphp01100
Metabolic pathways
sphp01110
Biosynthesis of secondary metabolites
sphp01120
Microbial metabolism in diverse environments
sphp01230
Biosynthesis of amino acids
Module
sphp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH20_16590
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH20_16590
Enzymes [BR:
sphp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LH20_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ALC13578
UniProt:
A0A0M4CRX4
LinkDB
All DBs
Position
3373620..3374426
Genome browser
AA seq
268 aa
AA seq
DB search
MADRFTKMHGLGNDFVVIDARTRAVEMTAARAHAIADRRHGIGCDQLILLEPSEKVDLKM
RIFNADGGEVEACGNATRCVATLIGKAAVIETLGGMLRVSPADGGAEVTLGKPAFDWEQI
PLAMPMDTRDMPVAWDELEHGAAVNVGNPHVIFFVPEADAVPLADLGPRIETDPLFPERV
NVNVASLDGENQLQLRVWERGVGLTQACGTGACATAVAAIRAGLVQSPVTISLPGGDLVI
RWAEGEPIVMSGAATRVFEGETDWARFG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgcttcaccaagatgcatggcctcggcaacgactttgtcgtcattgatgcg
cggacacgcgccgtcgagatgacggcagcgcgcgcgcatgcgatcgccgaccggcggcac
ggcatcggctgcgaccagctgatcctgctcgagccatccgagaaggtcgatctcaagatg
cgtatcttcaacgccgacggcggcgaggtagaggcctgcggcaacgcgacgcgctgcgtc
gcgacgctgatcggaaaggctgccgtgatcgagacgctgggcggcatgctgcgtgtcagc
ccggccgatggcggcgccgaggtgacgctgggcaaacccgccttcgattgggagcagatc
ccgctcgcaatgccgatggatacgcgtgacatgcccgttgcttgggacgagcttgagcat
ggcgcggcggtcaatgtcggcaatccgcacgtgatcttctttgtcccggaagccgatgcg
gttccgctcgccgaccttggacccaggatcgagacggatccgctttttcccgaacgcgtc
aatgtcaatgtcgcgagcctcgatggcgaaaatcagctgcagctgcgcgtctgggagcgc
ggggtggggctgacccaggcatgcgggaccggcgcctgcgccaccgcggtcgcggcgatc
cgcgcaggcctcgtccagtccccggtcaccatttcgctgcccggcggcgacctcgtgatc
cgctgggccgaaggtgagccgatcgtgatgagcggcgccgcgacgcgcgtgttcgagggc
gaaaccgactgggcgcgcttcggatga
DBGET
integrated database retrieval system