Shinella oryzae: K6301_00140
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Entry
K6301_00140 CDS
T08112
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
soj
Shinella oryzae
Pathway
soj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K6301_00140 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soj01007
]
K6301_00140 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_00140 (trpS)
Enzymes [BR:
soj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
K6301_00140 (trpS)
Amino acid related enzymes [BR:
soj01007
]
Aminoacyl-tRNA synthetase
Class I (G)
K6301_00140 (trpS)
Transfer RNA biogenesis [BR:
soj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K6301_00140 (trpS)
Prokaryotic type
K6301_00140 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
UPA24672
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All DBs
Position
30676..31743
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AA seq
355 aa
AA seq
DB search
MSAFKPLVFSGVQPTGNLHLGNYLGAIRKFVALQDDNDCIYCVVDLHAITAQLVHEDMRG
QIRSIAAAFIAAGIDPKKHIVFNQSAVPQHAELAWIFNCVARIGWMERMTQFKDKTGGKN
AEQVSLGLLAYPSLMAADILVYRATHVPVGDDQKQHLELTRDIAQKFNIDFGNHIRKAGT
GVDIVVGEEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMSKSDASDLSRINLTDDAETIS
KKIRKAKTDPDALPSEVEGLKGRPEADNLVGIYAALADKTKAEVLAEFGGQQFSAFKPAL
VDLSVNVLSPITDEMRRLMDDTSHIDAILRDGGERARARAEKTMKEVRDIVGFVQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattcaagcccctcgtcttctccggcgtgcagccgaccggcaatctccacctc
ggcaactatctcggcgcgatccgcaagttcgtggcgctgcaggatgataacgactgcatc
tattgcgtcgtggacctgcacgccatcaccgcgcagctggtgcacgaggatatgcgcggc
cagatccgctcgattgccgccgccttcatcgccgccggcatcgatccgaagaagcacatc
gtcttcaaccagtccgccgtgccgcagcatgccgagcttgcctggatcttcaactgcgtg
gcgcgcatcggctggatggagcgcatgacccagttcaaggacaagaccggcggcaagaat
gccgaacaggtctcgctcggtctgcttgcctatccgagcctgatggccgccgatatcctc
gtctaccgcgcgacgcatgtgcccgtcggcgacgaccagaagcagcacctggagctgacc
cgcgacatcgcgcagaagttcaacatcgacttcggcaatcacatccgcaaggccggcacc
ggcgtggatatcgtggtcggcgaggagccggtgcacgcctatttcccgatggtcgagccg
ctgatcggcggaccggcaccgcgcgtcatgagcctgcgcgacggcacgaagaagatgtcg
aagtccgatgcctccgacctgtcgcgcatcaacctcaccgacgatgccgagacgatctcc
aagaagatccgcaaggccaagaccgatccggacgccttgccgagcgaggtcgagggcctg
aagggacgccccgaggcggacaacctcgtcggcatctatgcggccctcgccgacaagacc
aaggccgaggttctcgccgagttcggcggccagcagttctcggccttcaagccggcgctg
gtcgatctctcggtcaacgttctctcgccgatcacggatgagatgcgccgcctgatggac
gacacgagccatatcgacgccatcctgcgcgatggtggcgaaagggcacgcgcgcgggcc
gaaaaaaccatgaaggaagtccgcgacatcgtcggttttgtgcagtaa
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