Silurus meridionalis (southern catfish): 124383292
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Entry
124383292 CDS
T08004
Symbol
wars2
Name
(RefSeq) tryptophan--tRNA ligase, mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124383292 (wars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124383292 (wars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124383292 (wars2)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
124383292 (wars2)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
124383292 (wars2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124383292 (wars2)
Prokaryotic type
124383292 (wars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF4164
Motif
Other DBs
NCBI-GeneID:
124383292
NCBI-ProteinID:
XP_046701772
LinkDB
All DBs
Position
3:complement(12155407..12171016)
Genome browser
AA seq
364 aa
AA seq
DB search
MAVSMRRNMRPLLGFIHKKTFNTRSFCNQKVSGVKRLHDGRVFSGIQPTGIPHLGNYLGA
LESWVTMQNDYSSVLYSIVDLHSITQPQNPELLQSNIMDMAASLLACGIDPTRSILFQQS
VVSEHAELSWILGCLTSMPRLRHLPQWKMKSKQKNEGSVGLYTYPVLQAADILLYKSTYV
PVGEDQIQHLELAQDLARIFNNKYGELFPEPCALLSSTRKVKSLRDPSFKMSKSDPQKLA
TIFLTDTPDDIVFKIRRAVTDFTSKVTFDPVGRPGVANLVSIHAAVSGQTVEDVVTLAKG
LDTCQYKAVVADAVVQRLEPIRQEIQRLKADRSHLESVLATGAEKARSLAAPMMQEVRKR
VGFS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccatgcgaaggaacatgagacctcttttaggtttcattcataagaaaact
tttaatacaaggtcgttttgcaaccaaaaagtgtccggagtgaagcgcctccatgatggg
cgagtgttctcaggaatccagcccactgggatccctcacctgggaaactaccttggcgcg
ctggagagctgggtgaccatgcagaatgactacagctcagtgttgtacagcattgttgat
ctgcactccatcacccagcctcagaacccagaattactacagagcaacatcatggacatg
gcagccagcctgctagcctgtggcattgaccctacacgctccatccttttccagcaatct
gtggtttcagaacatgctgagctctcctggatcctgggctgcctgaccagcatgcctcgc
ctacgccacctacctcaatggaagatgaagagtaaacagaagaatgaaggaagtgtgggt
ttgtatacctacccagtgttgcaggctgcagacatattgctctataaatccacatatgta
ccagtaggggaggatcagatccaacatttagaattagcccaagacctagcccgtattttc
aacaacaaatatggagagctttttcctgaaccttgtgcgctccttagttctacacggaaa
gtgaagtcgttaagagatccctccttcaagatgtcgaagtcagatccacaaaaattagcc
accatattcctcaccgacacccctgacgacatagtatttaaaatccgccgagctgtgact
gatttcacatctaaggtcacctttgacccagtaggccggccaggcgtggcgaatctggtg
tccatccatgcagctgtctcaggccaaactgtagaagatgtggtcacgttagccaaaggc
ctggacacttgccagtacaaggctgtggtggcagatgctgtggtgcagagactagagcct
atcaggcaggagatccaaagactcaaggcagacaggagtcacctggagagtgtgttggcc
acgggagctgagaaagcccgcagtctggctgccccaatgatgcaggaggtcaggaaacgt
gtgggcttctcctaa
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