Solanum lycopersicum (tomato): 101246271
Help
Entry
101246271 CDS
T02665
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101246271
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101246271
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101246271
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
101246271
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class I (G)
101246271
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101246271
Prokaryotic type
101246271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
101246271
NCBI-ProteinID:
XP_004246071
LinkDB
All DBs
Position
8:60677721..60686152
Genome browser
AA seq
403 aa
AA seq
DB search
MEKTELKDDKSKEVEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDESLIQRVQRLTN
RAPHVFLRRGVFFAHRDFNDILDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQD
AFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGGAF
YKNMVRVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHIFGNENIRCLIP
CAIDQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGENGKMSASDPNSAIYVTDSAKEI
KNKINRYAFSGGRDSIELHRKYGANLEVDIPFKYLGFFLDDDAEMEHIREEYGSGRMLTG
EIKKRLVEVLTDLVERHRRARAAVTDEMVDAFMAVRPLPNMFN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacggagctgaaggatgataaaagcaaagaggtagaagaggagcaagtagtg
aacccatgggaggtatcagcaaaagacggcgggaagattgactatgacaaattgatcgac
aaatttggttgccagaggcttgacgagtcgttaattcagagagttcaacgtcttacgaat
cgggcacctcatgttttccttcgccgtggagttttctttgctcatcgtgattttaatgat
atattggattcttatgagaaaggggagaagttttatttgtacactggcagaggaccttct
tctgaagctttgcatttgggtcatcttatccctttcatgtttacaaagtacttgcaggat
gcttttaaggtgccgcttgtaatacagttgactgatgatgagaaatgtatgtggaagaat
ttgtcagtggaagaaagccaaagacttgctcgtgagaatgctaaagacattattgcttgt
ggatttgatatttcaaagacgtttattttctctgattttgactatgttggtggcgccttt
tacaagaacatggtcagggttgcaaaatgtgtcacatacaataaggttgttggtattttt
ggtttcacaggtgaagatcacattgggaaagttagttttccaccagtccaggctgtgcca
tcctttcccagttcatttcctcatatctttggcaatgagaacattcgctgtttgattcca
tgtgccattgaccaggatccatatttccgaatgactcgagatgttgctccccggataggc
tatcacaagcctgctttgattgaatcatcattctttcctgcgcttcagggggagaatgga
aaaatgtctgctagtgatccaaattctgccatttatgtgactgattcagcaaaagagata
aaaaacaagataaacagatatgcattctcaggtggacgagactcaattgagttgcatagg
aagtacggagcaaacctggaggttgatataccatttaaatatcttggctttttcctggac
gatgatgcagagatggaacacattagagaggagtatggttcgggccgtatgctgacaggt
gaaattaaaaagaggctagttgaagtactaacagatctagttgaaagacatcgacgggct
agggcagcagtgactgatgagatggtagatgctttcatggctgtcagaccacttcccaat
atgttcaattga
DBGET
integrated database retrieval system
