Shigella flexneri 8401 (serotype 5b): SFV_2993
Help
Entry
SFV_2993 CDS
T00377
Symbol
speA
Name
(GenBank) biosynthetic arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00330
Arginine and proline metabolism
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
Module
sfv_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFV_2993 (speA)
Enzymes [BR:
sfv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
SFV_2993 (speA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
ABF05062
UniProt:
Q0T0V3
LinkDB
All DBs
Position
complement(3060795..3062693)
Genome browser
AA seq
632 aa
AA seq
DB search
MSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRL
PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG
LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV
LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL
QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC
SVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTV
PTAPVEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERA
WAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFP
VLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQFRD
QVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaggaagccagcaagatgctgcgtacttacaatattgcctggtggggcaat
aactactatgacgttaacgagctgggccacatcagcgtgtgcccggacccggacgtcccg
gaagctcgcgtcgatctcgcgcagttagtgaaaactcgtgaagcacagggtcagcgtctg
cctgcactgttctgtttcccacagatcctgcagcaccgtttgcgttccattaacgccgcg
ttcaaacgtgcgagggaatcctacggctataacggcgattacttccttgtttatccgatc
aaagttaaccagcaccgccgcgtgatcgagtccctgattcattcgggtgaaccgctgggt
ctggaagccggttccaaagccgagttgatggcagtgctggcacatgctggcatgactcgt
agcgtcatcgtctgcaacggttataaagaccgcgaatatatccgcctggcattaattggc
gagaagatggggcacaaggtctatctggtcattgagaagatgtcagaaatcgccattgtg
ctggatgaagcagaacgtctgaatgtcgttcctcgtttgggcgtgcgtgcacgtctggct
tcgcagggctcgggtaaatggcagtcctccggcggggaaaaatcgaagttcggcctggct
gcgactcaggtactgcaactggttgaaaccctgcgtgaagccgggcgtctcgacagcctg
caactactgcacttccacctcggttcgcagatggcgaatattcgcgatatcgcgacaggc
gttcgtgaatccgcgcgtttctatgtggaactgcacaagctgggcgtcaatattcagtgc
ttcgacgtcggcggcggtctgggcgtggattatgaaggcacccgttcgcagtctgactgc
tccgtaaactatggcctcaatgaatacgccaacaacatcatctgggcgattggcgatgcg
tgtgaagaaaatggtctgccgcatccgacggtaatcaccgaatcgggccgtgcggtgact
gcgcaccataccgtgctggtgtcgaatatcatcggcgtggaacgtaacgaatatacggtg
ccgaccgcgcccgtagaagatgcgccgcgtgcgctgcaaagcatgtgggaaacctggcag
gaaatgcacgaaccgggaactcgccgttctttgcgtgaatggttacacgacagccagatg
gatctgcacgacattcatatcggctactcttccggcacctttagcctgcaagaacgtgca
tgggcagaacaactctatctgagcatgtgccatgaagtgcagaagcaactggatccgcaa
aaccgtgcgcatcgtccgataatcgacgaactgcaggaacgtatggcggacaaaatgtac
gtcaatttctcgctgttccagtcaatgccggacgcatgggggatcgaccagttgttcccg
gttctaccgctggaagggctggatcaagtgccggaacgtcgcgctgtgctgctggatatt
acctgtgactctgacggtgctatcgaccactatattgatggtgatggtattgccacgaca
atgccaatgccggagtacgatccagagaatccgccgatgctcggtttctttatggtcggt
gcatatcaggagatccttggcaatatgcacaacctgttcggtgataccgaagcagttgac
gtgttcgtgttccctgacggtagcgtagaagtagaactgtctgacgaaggcgataccgtg
gcggacatgctgcaatatgtacagctcgatccgaaaacgctgttaacccagttccgcgat
caagtgaagaaaaccgatcttgatgctgaactgcaacaacagttccttgaagagttcgag
gcaggtttgtacggttatacttatcttgaagatgaataa
DBGET
integrated database retrieval system
