Shigella dysenteriae Sd197: SDY_2711
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Entry
SDY_2711 CDS
T00306
Symbol
gcpE
Name
(GenBank) conserved hypothetical protein
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00900
Terpenoid backbone biosynthesis
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
Module
sdy_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SDY_2711 (gcpE)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
SDY_2711 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
SDY_2711 (gcpE)
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GFIT
Motif
Pfam:
GcpE
DeoC
Motif
Other DBs
NCBI-ProteinID:
ABB62758
ShiBASE_China:
SDY2711
UniProt:
Q32D47
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Position
complement(2503964..2505082)
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AA seq
372 aa
AA seq
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MHSQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR
VSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM
VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV
KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL
AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV
SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLD
EARRIDVQQVEK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcatagccaggctccaattcaacgtagaaaatcaacacgtatttacgttgggaatgtg
ccgattggcgatggtgctcccatcgccgtacagtccatgaccaatacgcgtacgacagat
gtcgaagcaacggtcaatcaaatcaaggcgctggaacgcgttggcgctgatatcgtccgt
gtctccgtaccgacgatggacgcggcagaagcgttcaaactcatcaaacagcgggttaac
gtgccgctggtggctgacatccacttcgactatcgcattgcgctgaaagtagcggaatac
ggcgtcgattgtctgcgtattaaccctggcaatatcggtaatgaagagcgtattcgcatg
gtggttgactgcgcgcgcgataaaaacattccgatccgtattggcgttaacgccggatcg
ctggaaaaagatctgcaagaaaagtatggcgaaccgacgccgcaggcgttgctggaatcc
gccatgcgtcatgttgatcatctcgatcgcctgaacttcgatcagttcaaagtcagcgtg
aaagcgtctgacgtcttcctcgctgttgagtcttatcgtttgctggcaaaacaaatcgat
cagccgctgcatctggggatcaccgaagcgggtggcgcgcgcagcggggcagtaaaatcc
gccattggtttaggtctgctgctgtctgaaggcatcggcgacacgctgcgcgtatcactg
gcggccgatccggtcgaagagatcaaagtcggtttcgatattttgaaatcgctgcgtatc
cgttcgcgagggatcaacttcatcgcctgcccgacctgttcgcgtcaggaatttgatgtt
atcggtacggttaacgcgctggagcaacgcctggaagatatcatcactccgatggacgtt
tcgattatcggctgcgtggtgaatggcccaggtgaggcgctggtttctacactcggcgtc
accggcggcaacaagaaaagcggcctctatgaagatggcgtgcgcaaagaccgtctggac
aacaacgatatgatcgaccagctggaagcacgcattcgtgcgaaagccagtcagctggac
gaagcgcgtcgaattgacgttcagcaggtcgaaaaataa
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