Shigella dysenteriae Sd197: SDY_2016
Help
Entry
SDY_2016 CDS
T00306
Symbol
icdA
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00020
Citrate cycle (TCA cycle)
sdy00480
Glutathione metabolism
sdy00720
Other carbon fixation pathways
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
sdy01200
Carbon metabolism
sdy01210
2-Oxocarboxylic acid metabolism
sdy01230
Biosynthesis of amino acids
sdy04146
Peroxisome
Module
sdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SDY_2016 (icdA)
09102 Energy metabolism
00720 Other carbon fixation pathways
SDY_2016 (icdA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SDY_2016 (icdA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SDY_2016 (icdA)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SDY_2016 (icdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
ABB62111
ShiBASE_China:
SDY2016
UniProt:
Q32EZ4
LinkDB
All DBs
Position
complement(1824893..1826143)
Genome browser
AA seq
416 aa
AA seq
DB search
MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGE
RKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQ
ELDLYICLRPVRYYQGAPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLR
EEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA
FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIA
CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA
EMMLRHMGWTESADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIKNM
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaaagtagttgttccggcacaaggcaagaagatcaccctgcaaaacggcaaa
ctcaacgttcctgaaaatccgattatcccttacattgaaggtgatggaatcggtgtagat
gtaaccccagccatgctgaaagtggtcgacgctgcagtcgagaaagcctataaaggcgag
cgtaaaatctcctggatggaaatttacaccggtgaaaaatccacacaggtttatggtcag
gatgtctggctgcctgctgaaacccttgatctgattcgtgaatatcgcgttgccattaaa
ggtccgctgaccactcctgttggtggcggtattcgttctctgaacgttgccctgcgccag
gaactggatctctacatctgcctgcgtccggtacgttactatcagggcgccccaagcccg
gttaaacaccctgaactgaccgatatggttatcttccgtgaaaactcggaagacatttat
gcaggtatcgaatggaaagctgattctgccgacgctgagaaagtgattaaattcctgcgt
gaagagatgggggtgaagaaaattcgcttcccagaacattgtggtatcggtattaagccg
tgttcggaagaaggcaccaaacgtctggttcgtgcagcgatcgaatacgcaattgctaac
gatcgtgactctgtgactctggtgcacaaaggcaacatcatgaagttcaccgaaggcgcg
tttaaagactggggctaccagctggcgcgtgaagagtttggcggtgaactgatcgacggc
ggcccgtggctgaaagttaaaaacccgaacaccggcaaagagatcgtcattaaagacgtg
attgctgatgcattcctgcaacagatcctgctgcgtccggctgaatatgatgttatcgcc
tgtatgaacctgaacggtgactacatttctgacgccctggcagcgcaggttggcggtatc
ggtatcgcccctggtgcaaacatcggtgacgaatgcgccctgtttgaagccacccacggt
actgcgccgaaatatgccggtcaggacaaagttaacccaggttctattattctctctgct
gagatgatgttacgccacatgggttggaccgaatcggctgatctgattgttaaaggtatg
gaaggcgcaatcaacgccaagaccgtaacttacgacttcgaacgtctgatggaaggcgct
aaactgctgaaatgttcagagtttggtgatgcgatcatcaagaatatgtaa
DBGET
integrated database retrieval system