Seriola dumerili (greater amberjack): 111225471
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Entry
111225471 CDS
T05606
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic-like
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111225471
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdu01007
]
111225471
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111225471
Enzymes [BR:
sdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
111225471
Amino acid related enzymes [BR:
sdu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
111225471
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111225471
Prokaryotic type
111225471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-GeneID:
111225471
NCBI-ProteinID:
XP_022606088
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MTDCQGDGEGANSPMELYEKLNAQGDKVRVLNTAKAERAEIDAAVQLLLKLKVDYKQMTG
QDYKAGSPPSENSVVPDNGPAADDANDEDTVDPWNVSTTSAKGVDYDKLIVRFGSSKIEK
ELVDRIEKVSGQKPHRFLRRGIFFSHRDMHQVLDACEKQKSFYLYTGRGPSSEAMHVGHL
IPFIFTKWLQDVFDIPLVIQLTDDEKYLWKDLTIEDCHHFAVENAKDIIACGFDVNKTFI
FSDLDYMGASPEFYRNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFP
QIFGGRKDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASD
ANSSIFLTDTPKQIKNKVNKHAFSGGKDTVEEHRKYGGNPDVDVSFMYLTFFLEDDEQLE
KIRQDYSCGALLTGEVKKILIETLQPMIAQHQERRKQVTDETVKQFMTPRPLNFKL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacagactgtcagggtgacggcgaaggagcgaatagtccaatggagctgtatgaaaaa
ctgaacgctcaaggagataaagtcagagtcttgaacacggctaaagctgagagagctgaa
attgatgctgctgtccagttgctgctgaagttgaaagtggactacaaacagatgacaggt
caggattacaaagcaggaagtcccccctcagaaaactctgttgtccccgacaatgggcca
gcagcagatgatgcaaatgatgaagacacagttgacccatggaacgtttccaccaccagt
gccaagggggtagactacgacaaactcatagtgaggtttggcagcagtaaaattgaaaag
gagctggtggacagaatagaaaaagtctcgggacagaaacctcaccgctttctgagaaga
gggatcttcttttcacacagagatatgcatcaggtgcttgatgcgtgtgagaagcaaaag
tccttctacctttacactggcagaggtccgtcctctgaagccatgcacgttggtcacctc
atccccttcatcttcaccaagtggcttcaggatgtatttgacatccccctggtgatccag
ctgactgatgatgaaaagtatctgtggaaggatctaacaatagaagactgccaccatttc
gctgtggaaaatgccaaggacatcatcgcgtgtggttttgatgtcaacaagactttcatc
ttctctgaccttgactatatgggagcatctcctgaattctacaggaatgtggttaagatc
cagaagcatgtcacatttaaccaggtcaaaggcatctttggcttcacagacagtgactgc
attggaaagatcagcttcccagccatccaggcagctccgtccttcagtaactcttttcca
cagatctttggaggcaggaaggacatacagtgtctgatcccctgcgccatagaccaggac
ccttacttcaggatgacccgtgatgtagctccaaggatcggctatcccaaaccagcactg
ctgcactccaccttcttccccgccttgcagggggcgcagaccaagatgagcgccagtgac
gccaactcctccatcttcctcacggacacacccaaacagatcaaaaacaaggtcaacaaa
cacgcattttcgggggggaaagacacagtagaagagcacaggaagtacggtggaaaccca
gacgtagacgtctccttcatgtacttgaccttcttcctggaggacgatgagcagctggag
aagatcagacaggactattcatgtggagctctgctaacaggagaagtgaagaagattttg
attgagactctgcagccgatgatcgctcagcatcaagagagacgcaaacaagttacagat
gagacagtaaagcagttcatgactccaagacctttgaattttaagttgtag
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