Shewanella carassii: TUM17387_30860
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Entry
TUM17387_30860 CDS
T07543
Symbol
trpS-1
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
scaa
Shewanella carassii
Pathway
scaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TUM17387_30860 (trpS-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scaa01007
]
TUM17387_30860 (trpS-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_30860 (trpS-1)
Enzymes [BR:
scaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
TUM17387_30860 (trpS-1)
Amino acid related enzymes [BR:
scaa01007
]
Aminoacyl-tRNA synthetase
Class I (G)
TUM17387_30860 (trpS-1)
Transfer RNA biogenesis [BR:
scaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TUM17387_30860 (trpS-1)
Prokaryotic type
TUM17387_30860 (trpS-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BCV67727
LinkDB
All DBs
Position
3481974..3482975
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AA seq
333 aa
AA seq
DB search
MKQIILTGDRPTGKLHIGHYVGSLRQRVQVQDEFDQNVMIADYQALTDNGHNPAKVTDNI
LEVMADYLAAGLDPAKTRFCLQSALPALSELTCIYLNLVTVARLERNPTVKAEIQQKGFE
RSLPAGFLVYPVSQTADITAFRATHVPVGEDQLPMLEQSNEIVRRFNNLVGAEVLKECQA
ILSDTGRLPGLDGKAKMSKSLGNTIELGMSSDELKQAVFSMYTDPNHLRVEDPGRVEGNT
VFSYLDAFHPDKALVAELKAHYRRGGLGDMKCKRILNDCLQELLAPMRERRRQALADKGQ
LLAILQRGTEEARAISDAVLQDVKAAIGLNLLR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatcatactcacaggcgatagacccacaggtaaactgcatatcggccactat
gtcggttcactcaggcaaagagtccaggttcaagatgagttcgatcagaacgtgatgatc
gccgactatcaggccttgaccgacaacggccataacccggcaaaggtgaccgacaatatt
ctcgaagtcatggccgactacctggcggccgggttggatccggccaagacacgtttttgc
ctgcaaagcgcgctaccggcgctgtcggaactcacctgtatctacttaaacttggtgacg
gttgcccggcttgagcgcaatcccacagtcaaggcggagatccaacaaaaaggttttgag
cgcagcctaccggcgggttttctggtctaccccgtcagtcagaccgctgatattacggcc
tttcgcgccactcatgtgccagtgggtgaagatcaattacccatgctggagcaaagcaat
gaaatcgtccgtcgcttcaacaatctggtgggggccgaagtgctcaaggagtgtcaggca
attctcagtgacactggccgcctcccagggctcgacggcaaggccaagatgtccaaatcc
cttggcaataccatagagctgggaatgagcagtgacgaactcaagcaagcggtgttttcc
atgtatacggatcccaaccatctgagggtggaagatccaggcagagtcgagggcaatacg
gtattcagttatctcgatgccttccatccggacaaggcgctggtagccgagctcaaggcc
cattatcgcagaggcggcctcggggacatgaagtgcaaacgaatactcaacgactgcctg
caggaattactcgcgcccatgcgggagcggcgcaggcaagccctggcagacaaagggcaa
ctgctggcgatactgcagcggggtacggaagaagccagagccatcagtgatgccgtactg
caagatgtcaaagccgccatcgggcttaatctgcttcgctaa
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