Sphingomonas bisphenolicum: SBA_ch1_12950
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Entry
SBA_ch1_12950 CDS
T08354
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBA_ch1_12950 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbin01007
]
SBA_ch1_12950 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbin03016
]
SBA_ch1_12950 (trpS)
Enzymes [BR:
sbin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SBA_ch1_12950 (trpS)
Amino acid related enzymes [BR:
sbin01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SBA_ch1_12950 (trpS)
Transfer RNA biogenesis [BR:
sbin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SBA_ch1_12950 (trpS)
Prokaryotic type
SBA_ch1_12950 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
TraI_C
Motif
Other DBs
NCBI-ProteinID:
BBF69095
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All DBs
Position
1:complement(1297883..1298887)
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AA seq
334 aa
AA seq
DB search
MRVLSGIQPTGNLHLGNYLGAIRNWVRMQDEMDSQSQCFFFLADMHSITVHEGREQRIRN
VRDMAAALVAAGIDPDRSVLFNQARVPAHAELAWLLNGTARIGWLNRMTQFKDKVGKDRE
GASIGLFVYPVLQAADILLYNATHVPVGEDQKQHLELARDIAAKFNSDFGVELFTLPDPI
IPRESARIMSFRDGSAKMSKSDPSDMSRINLTDDDDAIMNKVKKAKTDPEPLPETAAGLV
GRPEANNLIGIYATLSGTTPDAVCAAFAGKGFGAFKPALGDLLVETLRPIRERFLALRTD
DAALDAILDKGAAKAAAAAEPTLRAAYDAMGLMR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctttccggcatccagccgaccggcaatctgcaccttggcaactacctaggc
gcgatccgcaactgggtgcggatgcaggatgagatggacagccagagtcagtgtttcttc
ttcctggccgatatgcattcgatcaccgtgcatgaagggcgcgagcagcgtatccgcaac
gtgcgcgacatggcggccgcactggtcgccgccgggatcgacccggaccgcagcgtgttg
ttcaatcaggcgcgcgtgcccgcccatgcggaactcgcctggttgctgaacggcaccgcg
cgcatcggctggctcaatcgcatgacgcagttcaaggacaaggtcggcaaggaccgcgag
ggcgcctcgatcggcctgttcgtctatccggtgctgcaggccgccgacatattgctctat
aacgccacccatgtcccggtgggcgaggaccagaagcagcatctggagctggcgcgcgac
attgcggccaagttcaacagcgatttcggcgtcgaactgttcaccctgcccgatccgatc
attccccgggaatcggcgcggatcatgtcgttccgcgacggtagcgcgaaaatgtccaag
tccgatccatcggacatgagccgtatcaacctgaccgatgacgacgacgccatcatgaac
aaggtgaagaaggccaagaccgatcccgaacccttgcccgaaacggccgccgggctggtc
ggccgcccagaggcgaacaacctgatcggcatctacgccaccctgtcgggcacgacgccg
gacgcagtctgcgcggcgttcgcgggcaaggggttcggcgcgttcaagccggcgttgggc
gatctgctggtcgaaactctgcgcccgattcgcgagcggtttctcgcattgcgcaccgac
gatgccgcactcgacgccatcctggacaagggcgcggccaaggcagcggcggcggcggag
ccgaccctgcgcgcggcctatgacgcaatggggctgatgcgataa
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