Sorghum bicolor (sorghum): 8062172
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Entry
8062172 CDS
T01086
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8062172
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbi01007
]
8062172
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8062172
Enzymes [BR:
sbi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
8062172
Amino acid related enzymes [BR:
sbi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
8062172
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
8062172
Prokaryotic type
8062172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
8062172
NCBI-ProteinID:
XP_002458470
UniProt:
C5XK01
A0A921UQA0
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Position
3:complement(62483876..62488591)
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AA seq
405 aa
AA seq
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MSRALLSHVLHRPPHFAYTCLRRSGVGARGVLASGIHPLRRLNCSAVEAVPGPTEEASAP
PARKKRVVSGVQPTGLVHLGNYLGAIKNWVALQDLYETFFFIVDLHAITLPYEAPLLSKA
TRSTAAIYLACGVDSSKASIFVQSHVRAHVELMWLLSSSTPIGWLNRMIQFKEKSRKAGD
ENVGVALLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLYGGRKWKKLGG
RGGLLFKVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKTD
SFPGMEFDNPERPECRNLLSIYQIITGKTKEEVVSECQHMNWGAFKTNLTEALIDHLQPI
QVRYEEIMSDPAYLDNVLLEGAGKAAEIADITLNNVYQAMGFLRR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgctcctctcccacgtcctccaccgcccgccgcacttcgcgtacacctgc
ttaagaaggagtggcgttggtgcccgaggagtgctcgcttctggcatccacccactccgt
cgtctcaattgcagcgcggttgaagccgttcccggccccactgaggaggcgtctgctcct
ccggcaaggaagaaaagagtagtttctggtgtacagccaactggattggttcaccttgga
aattatctaggtgcgattaagaattgggttgcacttcaggatttatacgagacattcttt
ttcatcgtggatcttcatgcaattactttaccatatgaggcgccactgctttctaaagca
acaagaagcactgctgcaatatatctggcatgtggcgttgacagctccaaggcttctatc
tttgtacagtctcatgtccgtgctcatgttgagttgatgtggctattgagttcttctact
cctattggctggctgaatagaatgatccagttcaaagagaagtctcgcaaggcgggtgat
gaaaatgttggggttgcacttttgacttatcctgttctaatggcttctgacatccttttg
taccagtccgatctggtacctgttggtgaagatcaaacacaacatttggaattaactcgt
gaaatagctgagcgtgtaaataatctttatggtggaagaaagtggaagaaattgggaggg
agaggggggttgctatttaaggttcctgaagcccttattcctccagcaggggctcgtgtt
atgtccctaactgatggtctctccaagatgtccaagtctgcaccttcagatcagtctcgt
attaaccttcttgacccaaaagatgtgattgcaaataagatcaagcgctgcaaaactgac
tcattcccaggtatggagttcgacaacccagagaggccggagtgcagaaatcttctctcc
atatatcagattatcactgggaagactaaggaggaagttgttagcgagtgccaacacatg
aactggggtgcattcaagactaatcttacggaagctctaattgatcatctgcagcctatt
caggtccgttatgaggagataatgtctgacccagcctacttggataatgttcttttagaa
ggagccggaaaagctgctgagatagcagacatcaccctcaacaatgtttaccaagccatg
ggtttcttgcgtagataa
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