Shewanella amazonensis: Sama_0516
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Entry
Sama_0516 CDS
T00445
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
saz
Shewanella amazonensis
Pathway
saz03030
DNA replication
saz03430
Mismatch repair
saz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sama_0516
03430 Mismatch repair
Sama_0516
03440 Homologous recombination
Sama_0516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saz03032
]
Sama_0516
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_0516
03029 Mitochondrial biogenesis [BR:
saz03029
]
Sama_0516
DNA replication proteins [BR:
saz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sama_0516
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Sama_0516
TLS (translesion DNA synthesis) factors
Other SOS response factors
Sama_0516
Mitochondrial biogenesis [BR:
saz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Sama_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
TFIIA
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABL98726
UniProt:
A1S2X0
LinkDB
All DBs
Position
636101..636805
Genome browser
AA seq
234 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDNQGQQQERTEWHRVVMF
GKLAEIAGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYTTEIVVDQSGSMQMLGGRNQGQG
QGAPMGGQSQGGQSQGGYSAPAQNQYAPAPQAAQPSYSAPAQQPQQGGFQQPQQAQGGYG
QQAPQQQGGYQSKPQQSAPAYQPQQAPQQRPAPQPQQQNYTPDLDDGWDDDIPF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtgaataaagtgattctggtaggtaacctggggcaagaccctgag
gtgcgctacatgcccaacggcaatgcggtagccaatatcacggtcgccaccagcgagtcc
tggaaggacaaccaaggtcagcagcaggagcgtaccgaatggcaccgtgtggtgatgttt
ggcaagctggctgaaatcgccggtgagtacctgcgcaagggctctcaggtttacctggaa
ggcaagctgcaaacccgtaagtggaaagatcagagtggtcaggacagatacaccactgaa
atcgtggtggaccagagcggcagcatgcagatgctcggcggccgcaaccagggccagggc
cagggcgcgccaatgggcggtcagtcacagggtggccagtctcagggtggttacagcgca
cctgctcaaaaccaatacgctccagcgccgcaggccgcacagccaagctacagcgcacct
gctcagcagccacagcaaggtggtttccagcagccacagcaggctcagggtggttatggc
cagcaggcgccacagcagcagggcggttatcagagcaagcctcagcagtctgctcccgct
taccagccacaacaggcaccacagcagcgtccagcgcctcagccacaacagcagaactac
actcctgatctggatgacggctgggacgacgatatcccgttctga
DBGET
integrated database retrieval system
