Rhodococcus ruber: CS378_23630
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Entry
CS378_23630 CDS
T05142
Symbol
kgd
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00020
Citrate cycle (TCA cycle)
rrz00630
Glyoxylate and dicarboxylate metabolism
rrz00785
Lipoic acid metabolism
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01120
Microbial metabolism in diverse environments
rrz01200
Carbon metabolism
rrz01210
2-Oxocarboxylic acid metabolism
Module
rrz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rrz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CS378_23630 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
CS378_23630 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CS378_23630 (kgd)
Enzymes [BR:
rrz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CS378_23630 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
CS378_23630 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
CS378_23630 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
CS378_23630 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ATQ31435
UniProt:
A0A098BUI6
LinkDB
All DBs
Position
complement(5158498..5162274)
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AA seq
1258 aa
AA seq
DB search
MSSSSTSQFGQNQWLVDEMYQRFQDDPSSVDASWHEFLTDYSPEAAVAGGANGATQTQRP
AQSSAPTSTESTPASKAAPAETPPKATPAPAKAGTAPAKAAPKPAEPAAKPAAAKPAPAK
PAAKPAPAKPAASATQEESKVLRGAAAAVAKNMNASLSIPTATSVRAIPAKLMVDNRIVI
NNHLARTRGGKVSFTHLLGYAIVQAVKAFPNMNRHFAEIDGKPNAVTPAHTNLGLAIDLA
GKDGNRSLVVAAIKNCESMNFAQFYSAYEDIVRRARDGKLTAEDFSGVTISLTNPGGIGT
VHSVPRLMPGQGAIIGAGAMEYPAEFQGASDERIAELGVGKLMTLTSTYDHRIIQGAESG
DFLRTVHNLLISDDFYDEIFHTLHIPYEPVRWRKDVPEGAVDKSTRVLELIAAYRSRGHL
MADTDPLQFVKDKFRSHPDLDVTTHDLTLWDLDREFNVGGFHGQQRMKLRDVLSVLRDAY
CRHVGVEYTHILDPEQQQWLQERVEAHHVKPTVAQQKYILSRLNAAEAFETFLQTKYVGQ
KRFSLEGAESVIPMMDAIIDQAAEHELDEVAIAMPHRGRLNVLANIVGKPYSKIFTEFEG
NLNPAAAHGSGDVKYHLGAEGNYIQMFGDNDINVSLTANPSHLEAVNPVLEGLVRAKQDI
LDKGEGGFTVMPLLLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHIVVNNQVGFTTAPE
HSRSSEYCTDVAKMIGAPIFHVNGDDPEACVWVARLAVDFREKFNKDVVIDMICYRRRGH
NEGDDPSMTQPAMYDVIDTKRSVRKSYTESLIGRGDISLKEAEDALRDYQGQLERVFNEV
RELEKFKPEPSESVELDQTPPAKLTTAVDKSVLERIGDAFVNVPEGFSVHPRVKPVIEKR
REMSREGHIDWAYAELLAFGSLVEQGALVRLAGQDSRRGTFTQRHAVLIDRKTGAEYTPL
QQVAAEGGKGGKFMVYDSALTEFAGLGFEYGYSVGNPEALVLWEAQFGDFVNGAQSIIDE
FISSGEAKWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLCAEGSMTVAMPSTPASYFH
LLRRHHLDGIRRPLVVFTPKSMLRNKAAVSNLEDFTNGKFRSVFEEPMYESDGGDREKVT
RVLLTSGKLYWELKAKKDKEKRDDVAILRIEQLYPVPRRRIAEALDRYPNAHEFFWVQEE
PANQGAWPFLGLALPEMLPEKLSGIKRASRRAMSAPSSGSSKVHAVEQQEILEKAFGQ
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagctctacttcccagttcggacagaaccagtggttggttgacgagatgtac
cagcggttccaggacgatccgtcgtccgtggacgccagctggcacgaattcttgacggac
tactccccggaggcggcggtcgcaggtggcgcgaacggtgccacgcagacccagcgtccg
gcgcagagttccgctccgacctccaccgaatccactcccgcctcgaaggccgccccggcc
gagactccgccgaaggccacccccgccccggcgaaggccggcaccgccccggcgaaggcc
gctccgaagccggccgagcccgccgccaagccggcggccgcgaagccggcccccgcgaag
cccgccgccaagccggcccccgcgaagcccgccgcttcggctacccaggaagagtccaag
gttctccgtggcgctgctgctgccgtcgcgaagaacatgaacgcctcgctttcgatcccg
accgccaccagtgtgcgcgccatccctgcgaagctgatggtcgacaaccggatcgtcatc
aacaaccacctcgcccgtacccgcggcggcaaggtgtcgttcacccacctgctcggctac
gccatcgtgcaggcggtgaaggcgttcccgaacatgaaccgccacttcgccgagatcgac
ggcaagccgaacgcggtcacccccgcgcacaccaacctcgggctggccatcgacctggcc
ggcaaggacggcaaccgttcgctcgtcgtcgccgcgatcaagaactgcgagtcgatgaac
ttcgcgcagttctattccgcgtacgaggacatcgtccgtcgtgcgcgcgacggcaagctc
accgccgaggacttctccggggtcaccatctcgctgaccaacccgggcggcatcggcacc
gtgcactcggtgccccgcctgatgccgggccagggcgccatcatcggcgccggcgcgatg
gagtacccggccgagttccagggcgcctccgacgagcgcatcgccgagctcggcgtcggc
aagctcatgacgttgacctccacgtacgatcaccgcatcatccagggcgcggagtccggc
gacttcctgcggaccgtccacaacctgctcatcagcgacgatttctacgacgagatcttc
cacacgctgcacatcccctacgagccggtccgctggcgcaaggacgtgccggaaggcgcc
gtcgacaagagcacccgcgtcctcgagctgatcgccgcctaccgcagccgcggccacctg
atggccgacacggatccgctgcagttcgtcaaggacaagttccggtcgcacccggacctc
gacgtcaccacccacgacctgaccctgtgggacctcgaccgggagttcaacgtcggcggc
ttccacgggcagcagcgcatgaagctgcgcgacgtgctgtcggtgctgcgggacgcctac
tgccgccacgtcggcgtggagtacacccacatcctcgaccccgagcagcagcagtggctg
caggagcgcgtcgaggcgcaccacgtcaagccgaccgtggcacagcagaagtacatcctc
agccgcctcaacgccgccgaggcgttcgagacgttcctgcagaccaagtacgtcggccag
aagcggttctcgctcgagggcgccgagtcggtcatcccgatgatggacgcgatcatcgac
caggccgccgagcacgagctcgacgaggtcgccatcgcgatgccgcaccgcggccgcctg
aacgtgctggccaacatcgtcggcaagccgtactcgaagatcttcaccgagttcgagggc
aacctgaacccggccgctgcccacggatccggcgacgtgaagtaccacctcggcgccgag
ggcaactacatccagatgttcggcgacaacgacatcaacgtctcgctcacggcgaacccg
tcgcatctcgaggccgtcaacccggtcctcgagggcctcgtgcgcgccaagcaggacatc
ctggacaagggcgagggtggcttcaccgtcatgccgctgctgctgcacggtgacgcggcg
ttcgccggccagggtgtcgtggccgagaccctcaacctcgcgctgctacggggctaccgc
accggcggcaccgtgcacatcgtcgtcaacaaccaggtcggcttcaccacggcccccgag
cactcgcggtcgtcggagtactgcaccgacgtcgcgaagatgatcggcgcgccgatcttc
cacgtcaacggcgacgacccggaggcgtgcgtgtgggtggcccgcctcgccgtggacttc
cgcgagaagttcaacaaggacgtcgtcatcgacatgatctgctaccgccgtcgcggccac
aacgagggcgacgacccgtcgatgacgcagccggcgatgtacgacgtgatcgacaccaag
cgcagcgtccgcaagagctacaccgagtccctcatcggtcgtggcgacatctcgctcaaa
gaggccgaggacgcgctgcgcgactaccagggccagctcgaacgggtcttcaacgaggtc
cgcgagctcgaaaagttcaagccggagccgtccgagtcggtcgagctcgaccagacgccg
ccggcgaagctgaccaccgcggtcgacaagtcggtgctcgagcggatcggcgacgcgttc
gtcaacgtccccgagggcttctccgtgcatccgcgcgtcaagccagtcatcgagaagcgt
cgcgagatgtcccgtgagggccacatcgactgggcgtacgccgagctgctcgcgttcggt
tcgctggtcgagcagggcgcgctggtgcgtctggccggccaggactcgcgccgcggcacg
ttcacccagcgtcacgcggtgctcatcgaccgcaagaccggcgccgagtacacccccctg
cagcaggtcgcggccgagggcggcaagggcggcaagttcatggtgtacgactcggcgctc
accgagttcgcgggcctgggcttcgagtacggctactccgtgggcaaccccgaggcgctg
gtgctgtgggaggcgcagttcggcgacttcgtcaacggcgcgcagtccatcatcgacgag
ttcatctcctccggcgaagccaagtggggccagctctccgacgtggtgctgctgctgccg
cacggccacgagggccagggcccggaccacacctcgggccgcatcgagcggttcctgcag
ctgtgtgcggagggttcgatgacggtggccatgccgtccaccccggcaagctacttccac
ctgctgcgccggcatcacctcgacgggatccgccgtccgctggtggtgttcacgccgaag
tcgatgctgcgcaacaaggccgcggtcagcaacctcgaggacttcaccaacggtaagttc
cgctcggtgttcgaggagccgatgtacgagagcgacggcggcgaccgcgagaaggtcacc
cgggttctgctgacctccggcaagctctactgggagctgaaggccaagaaggacaaggag
aagcgggacgacgtcgcgatcctgcggatcgagcagctgtacccggtgccgcgccggcgt
atcgccgaggcactcgaccggtacccgaacgcgcacgagttcttctgggtgcaggaggag
ccggccaaccagggcgcgtggccgttcctgggcctggcgctgccggagatgctgcccgag
aagctgtcgggcatcaagcgggcgtcgcgccgcgcgatgtcggcgccgtcgtcggggtcg
agcaaggtgcacgctgtcgagcagcaggagatcctggagaaggcgttcggtcagtag
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