Ruditapes philippinarum (Manila clam): 132732414
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Entry
132732414 CDS
T09557
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic-like
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132732414
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132732414
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132732414
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
132732414
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132732414
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132732414
Prokaryotic type
132732414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF4287
Motif
Other DBs
NCBI-GeneID:
132732414
NCBI-ProteinID:
XP_060574814
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MGDEVKQMNELSTEDEDFVDPWNVESKSATGIDYDKLIKRFGSQKVDDELIKRIEKVTGK
PVHHLIRRGIFFSQRDMHQILNLYEQKKPFYLYTGRGPSSEAMHLGHLIPFIFTKWLQET
FDVPLVIQMTDDEKFLWKDLALEETNRLAHENVKDIIALGFDVNKTFIFSDLEYIGSCPD
FYKNMLRVQKLVTFNQVKGIFGFGDSDCIGKISFPAIQAAPSFSSSFPLIFNGKKDVPCL
IPCAIDQDPYFRMTRDVAPRMGCLKPALIHSTFFPALQGAQSKMSASDPNSSIFLTDTDK
QIKNKVNKYAFSGGGATVEEHKEKGGNCDVDVSYQYLTFFMEDDDRLAQIKKEYTSGELL
TGYLKKELIEILQKIVGEHRKRRAEVTDEVMRQFMTPRKLNYQY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaggtgaaacaaatgaacgaactgtcaacagaagatgaggactttgttgat
ccgtggaatgttgagagcaaatcagccactggcatagactatgataaattgataaaacgt
tttggtagtcaaaaagtggatgatgagctgatcaaaagaattgagaaagtgacgggtaaa
cctgtccatcaccttatacgcaggggaatcttcttttctcagagagatatgcatcagatt
ttgaacctgtatgaacagaagaaaccattttatttatacacaggccggggaccatcttca
gaagcaatgcatcttgggcacttgatcccatttatattcacaaaatggttacaggaaaca
tttgatgtccctcttgtcattcaaatgacagatgatgagaaatttctatggaaggatctg
gccctcgaggaaactaatagactagcacatgagaatgttaaagacatcatcgctctaggg
tttgatgtaaacaaaacattcatattcagtgacctggaatatataggatcatgtccagat
ttttacaagaatatgttacgtgtgcaaaagttagtgacatttaaccaagtgaagggaata
tttggatttggtgatagtgactgtataggcaagatcagttttccagctatacaggcggct
cctagctttagttcatcatttcctctcatatttaatggcaaaaaagacgtcccatgcttg
attccttgtgcaatagatcaggatccgtatttcaggatgacaagagatgtagctcctaga
atgggttgtttaaaaccagcacttattcattccacgtttttcccagcactgcaaggggca
cagagtaaaatgagtgccagtgatccaaactcttctattttcctgacagacacagataaa
cagattaagaataaagtcaacaagtatgccttttctggtgggggtgccactgtagaagag
cacaaagaaaagggaggtaattgtgatgttgatgtttcctaccagtatctcactttcttc
atggaggacgatgacagattagcccaaataaagaaggaatatacaagtggcgaacttctc
acaggatatttgaagaaggaattgatcgaaattctgcaaaagattgtcggagagcatcgg
aagaggagggcagaggtcacggacgaagttatgagacagttcatgactccacgcaaactt
aattatcaatattaa
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